Gene : Bradi2g49175 B. distachyon v3.1
Defline:  (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase Genomic Order:  5904
Name:  ? Bradi2g49175 Secondary Identifier:  ? PAC:32773691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g49175 0.5kb upstream 0.5kb upstream 18951 true Bd2: 49060454-49079404 Brachypodium distachyon
Bradi2g49175 0.5kb upstream 0.5kb upstream 500 false Bd2: 49060454-49060953 Brachypodium distachyon
Bradi2g49175 0.5kb downstream 0.5kb downstream 18951 true Bd2: 49060954-49079904 Brachypodium distachyon
Bradi2g49175 0.5kb downstream 0.5kb downstream 500 false Bd2: 49079405-49079904 Brachypodium distachyon
Bradi2g49175 1.0kb upstream 1.0kb upstream 19451 true Bd2: 49059954-49079404 Brachypodium distachyon
Bradi2g49175 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49059954-49060953 Brachypodium distachyon
Bradi2g49175 1.0kb downstream 1.0kb downstream 19451 true Bd2: 49060954-49080404 Brachypodium distachyon
Bradi2g49175 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49079405-49080404 Brachypodium distachyon
Bradi2g49175 2.0kb upstream 2.0kb upstream 20451 true Bd2: 49058954-49079404 Brachypodium distachyon
Bradi2g49175 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49058954-49060953 Brachypodium distachyon
Bradi2g49175 2.0kb downstream 2.0kb downstream 20451 true Bd2: 49060954-49081404 Brachypodium distachyon
Bradi2g49175 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49079405-49081404 Brachypodium distachyon
Bradi2g49175 5.0kb upstream 5.0kb upstream 23451 true Bd2: 49055954-49079404 Brachypodium distachyon
Bradi2g49175 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49055954-49060953 Brachypodium distachyon
Bradi2g49175 5.0kb downstream 5.0kb downstream 23451 true Bd2: 49060954-49084404 Brachypodium distachyon
Bradi2g49175 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49079405-49084404 Brachypodium distachyon
Bradi2g49175 10.0kb upstream 10.0kb upstream 28451 true Bd2: 49050954-49079404 Brachypodium distachyon
Bradi2g49175 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49050954-49060953 Brachypodium distachyon
Bradi2g49175 10.0kb downstream 10.0kb downstream 28451 true Bd2: 49060954-49089404 Brachypodium distachyon
Bradi2g49175 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49079405-49089404 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588468 5269 Grass View MSA
122048417 5273 Angiosperm View MSA
121348485 5274 Embryophyte View MSA
123426265 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.273        
cufflinks 0.456        
cufflinks 0.349        
cufflinks 0.38        
cufflinks 0.177       Low
cufflinks 0.355        
cufflinks 0.38        
cufflinks 0.331        
cufflinks 0.377        
cufflinks 0.242        
cufflinks 0.173       Low
cufflinks 0.279        
cufflinks 0.104       Low
cufflinks 0.134       Low
cufflinks 0.104       Low
cufflinks 0.355        
cufflinks 0.516       High
cufflinks 0.561       High
cufflinks 0.426        
cufflinks 0.235        
cufflinks 0.441        
cufflinks 0.333        
cufflinks 0.303        
cufflinks 0.327        
cufflinks 0.412        
cufflinks 0.306        
cufflinks 0.167       Low
cufflinks 0.295        
cufflinks 0.343        
cufflinks 0.389        

0 Strain