Gene : Bradi2g49280 B. distachyon v3.1
Defline:  (1 of 1) PTHR13697//PTHR13697:SF34 - PHOSPHOFRUCTOKINASE // SUBFAMILY NOT NAMED Genomic Order:  5918
Name:  ? Bradi2g49280 Secondary Identifier:  ? PAC:32776965
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ANAEROFRUCAT-PWY Brachypodium distachyon pathologic  
Bdistachyon ANAGLYCOLYSIS-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-1042 Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g49280 0.5kb upstream 0.5kb upstream 9041 true Bd2: 49162585-49171625 Brachypodium distachyon
Bradi2g49280 0.5kb upstream 0.5kb upstream 500 false Bd2: 49171126-49171625 Brachypodium distachyon
Bradi2g49280 0.5kb downstream 0.5kb downstream 9041 true Bd2: 49162085-49171125 Brachypodium distachyon
Bradi2g49280 0.5kb downstream 0.5kb downstream 500 false Bd2: 49162085-49162584 Brachypodium distachyon
Bradi2g49280 1.0kb upstream 1.0kb upstream 9541 true Bd2: 49162585-49172125 Brachypodium distachyon
Bradi2g49280 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49171126-49172125 Brachypodium distachyon
Bradi2g49280 1.0kb downstream 1.0kb downstream 9541 true Bd2: 49161585-49171125 Brachypodium distachyon
Bradi2g49280 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49161585-49162584 Brachypodium distachyon
Bradi2g49280 2.0kb upstream 2.0kb upstream 10541 true Bd2: 49162585-49173125 Brachypodium distachyon
Bradi2g49280 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49171126-49173125 Brachypodium distachyon
Bradi2g49280 2.0kb downstream 2.0kb downstream 10541 true Bd2: 49160585-49171125 Brachypodium distachyon
Bradi2g49280 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49160585-49162584 Brachypodium distachyon
Bradi2g49280 5.0kb upstream 5.0kb upstream 13541 true Bd2: 49162585-49176125 Brachypodium distachyon
Bradi2g49280 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49171126-49176125 Brachypodium distachyon
Bradi2g49280 5.0kb downstream 5.0kb downstream 13541 true Bd2: 49157585-49171125 Brachypodium distachyon
Bradi2g49280 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49157585-49162584 Brachypodium distachyon
Bradi2g49280 10.0kb upstream 10.0kb upstream 18541 true Bd2: 49162585-49181125 Brachypodium distachyon
Bradi2g49280 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49171126-49181125 Brachypodium distachyon
Bradi2g49280 10.0kb downstream 10.0kb downstream 18541 true Bd2: 49152585-49171125 Brachypodium distachyon
Bradi2g49280 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49152585-49162584 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588642 5269 Grass View MSA
122042097 5273 Angiosperm View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.555        
cufflinks 0.641        
cufflinks 0.525        
cufflinks 0.573        
cufflinks 0.452        
cufflinks 0.584        
cufflinks 0.626        
cufflinks 0.421        
cufflinks 0.607        
cufflinks 0.362        
cufflinks 0.824        
cufflinks 0.575        
cufflinks 0.822        
cufflinks 0.572        
cufflinks 0.578        
cufflinks 0.778        
cufflinks 0.366        
cufflinks 4.668       High
cufflinks 0.362        
cufflinks 0.267       Low
cufflinks 1.683       High
cufflinks 0.563        
cufflinks 0.566        
cufflinks 0.664        
cufflinks 0.702        
cufflinks 0.473        
cufflinks 0.651        
cufflinks 0.473        
cufflinks 0.463        
cufflinks 0.727        

0 Strain