Gene : Bradi2g45810 B. distachyon v3.1
Defline:  (1 of 1) PTHR12599:SF2 - PCD/DCOH-LIKE PROTEIN 2 Genomic Order:  5480
Name:  ? Bradi2g45810 Secondary Identifier:  ? PAC:32771120
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g45810 0.5kb upstream 0.5kb upstream 6915 true Bd2: 46009974-46016888 Brachypodium distachyon
Bradi2g45810 0.5kb upstream 0.5kb upstream 500 false Bd2: 46009974-46010473 Brachypodium distachyon
Bradi2g45810 0.5kb downstream 0.5kb downstream 6915 true Bd2: 46010474-46017388 Brachypodium distachyon
Bradi2g45810 0.5kb downstream 0.5kb downstream 500 false Bd2: 46016889-46017388 Brachypodium distachyon
Bradi2g45810 1.0kb upstream 1.0kb upstream 7415 true Bd2: 46009474-46016888 Brachypodium distachyon
Bradi2g45810 1.0kb upstream 1.0kb upstream 1000 false Bd2: 46009474-46010473 Brachypodium distachyon
Bradi2g45810 1.0kb downstream 1.0kb downstream 7415 true Bd2: 46010474-46017888 Brachypodium distachyon
Bradi2g45810 1.0kb downstream 1.0kb downstream 1000 false Bd2: 46016889-46017888 Brachypodium distachyon
Bradi2g45810 2.0kb upstream 2.0kb upstream 8415 true Bd2: 46008474-46016888 Brachypodium distachyon
Bradi2g45810 2.0kb upstream 2.0kb upstream 2000 false Bd2: 46008474-46010473 Brachypodium distachyon
Bradi2g45810 2.0kb downstream 2.0kb downstream 8415 true Bd2: 46010474-46018888 Brachypodium distachyon
Bradi2g45810 2.0kb downstream 2.0kb downstream 2000 false Bd2: 46016889-46018888 Brachypodium distachyon
Bradi2g45810 5.0kb upstream 5.0kb upstream 11415 true Bd2: 46005474-46016888 Brachypodium distachyon
Bradi2g45810 5.0kb upstream 5.0kb upstream 5000 false Bd2: 46005474-46010473 Brachypodium distachyon
Bradi2g45810 5.0kb downstream 5.0kb downstream 11415 true Bd2: 46010474-46021888 Brachypodium distachyon
Bradi2g45810 5.0kb downstream 5.0kb downstream 5000 false Bd2: 46016889-46021888 Brachypodium distachyon
Bradi2g45810 10.0kb upstream 10.0kb upstream 16415 true Bd2: 46000474-46016888 Brachypodium distachyon
Bradi2g45810 10.0kb upstream 10.0kb upstream 10000 false Bd2: 46000474-46010473 Brachypodium distachyon
Bradi2g45810 10.0kb downstream 10.0kb downstream 16415 true Bd2: 46010474-46026888 Brachypodium distachyon
Bradi2g45810 10.0kb downstream 10.0kb downstream 10000 false Bd2: 46016889-46026888 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588275 5269 Grass View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.935        
cufflinks 1.482       High
cufflinks 1.18        
cufflinks 1.563       High
cufflinks 0.83        
cufflinks 1.139        
cufflinks 1.397        
cufflinks 0.835        
cufflinks 1.049        
cufflinks 0.967        
cufflinks 0.682       Low
cufflinks 0.957        
cufflinks 0.777        
cufflinks 0.67       Low
cufflinks 0.792        
cufflinks 1.217        
cufflinks 1.325        
cufflinks 1.182        
cufflinks 1.485       High
cufflinks 0.333       Low
cufflinks 1.274        
cufflinks 0.965        
cufflinks 0.89        
cufflinks 1.089        
cufflinks 1.363        
cufflinks 1.275        
cufflinks 0.691       Low
cufflinks 1.062        
cufflinks 1.114        
cufflinks 1.207        

0 Strain