Gene : Bradi4g07380 B. distachyon v3.1
Defline:  (1 of 5) PTHR21649//PTHR21649:SF31 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  960
Name:  ? Bradi4g07380 Secondary Identifier:  ? PAC:32783837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g07380 0.5kb upstream 0.5kb upstream 2684 true Bd4: 6276453-6279136 Brachypodium distachyon
Bradi4g07380 0.5kb upstream 0.5kb upstream 500 false Bd4: 6278637-6279136 Brachypodium distachyon
Bradi4g07380 0.5kb downstream 0.5kb downstream 2684 true Bd4: 6275953-6278636 Brachypodium distachyon
Bradi4g07380 0.5kb downstream 0.5kb downstream 500 false Bd4: 6275953-6276452 Brachypodium distachyon
Bradi4g07380 1.0kb upstream 1.0kb upstream 3184 true Bd4: 6276453-6279636 Brachypodium distachyon
Bradi4g07380 1.0kb upstream 1.0kb upstream 1000 false Bd4: 6278637-6279636 Brachypodium distachyon
Bradi4g07380 1.0kb downstream 1.0kb downstream 3184 true Bd4: 6275453-6278636 Brachypodium distachyon
Bradi4g07380 1.0kb downstream 1.0kb downstream 1000 false Bd4: 6275453-6276452 Brachypodium distachyon
Bradi4g07380 2.0kb upstream 2.0kb upstream 4184 true Bd4: 6276453-6280636 Brachypodium distachyon
Bradi4g07380 2.0kb upstream 2.0kb upstream 2000 false Bd4: 6278637-6280636 Brachypodium distachyon
Bradi4g07380 2.0kb downstream 2.0kb downstream 4184 true Bd4: 6274453-6278636 Brachypodium distachyon
Bradi4g07380 2.0kb downstream 2.0kb downstream 2000 false Bd4: 6274453-6276452 Brachypodium distachyon
Bradi4g07380 5.0kb upstream 5.0kb upstream 7184 true Bd4: 6276453-6283636 Brachypodium distachyon
Bradi4g07380 5.0kb upstream 5.0kb upstream 5000 false Bd4: 6278637-6283636 Brachypodium distachyon
Bradi4g07380 5.0kb downstream 5.0kb downstream 7184 true Bd4: 6271453-6278636 Brachypodium distachyon
Bradi4g07380 5.0kb downstream 5.0kb downstream 5000 false Bd4: 6271453-6276452 Brachypodium distachyon
Bradi4g07380 10.0kb upstream 10.0kb upstream 12184 true Bd4: 6276453-6288636 Brachypodium distachyon
Bradi4g07380 10.0kb upstream 10.0kb upstream 10000 false Bd4: 6278637-6288636 Brachypodium distachyon
Bradi4g07380 10.0kb downstream 10.0kb downstream 12184 true Bd4: 6266453-6278636 Brachypodium distachyon
Bradi4g07380 10.0kb downstream 10.0kb downstream 10000 false Bd4: 6266453-6276452 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587736 5269 Grass View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 950.612     High  
cufflinks 287.797     High  
cufflinks 33.834     High Low
cufflinks 84.779     High  
cufflinks 1502.96     High High
cufflinks 1301.722     High  
cufflinks 972.961     High  
cufflinks 1023.249     High  
cufflinks 1160.948     High  
cufflinks 564.914     High  
cufflinks 39.799     High Low
cufflinks 1301.025     High  
cufflinks 1768.447     High High
cufflinks 437.4     High  
cufflinks 1079.164     High  
cufflinks 1330.138     High  
cufflinks 1263.101     High  
cufflinks 3.91       Low
cufflinks 99.518     High  
cufflinks 65.032     High  
cufflinks 461.743     High  
cufflinks 507.34     High  
cufflinks 968.776     High  
cufflinks 1181.257     High  
cufflinks 1153.248     High  
cufflinks 38.751     High Low
cufflinks 238.827     High  
cufflinks 106.962     High  
cufflinks 293.301     High  
cufflinks 846.977     High  

0 Strain