Gene : Bradi2g46340 B. distachyon v3.1
Defline:  (1 of 1) PTHR23257//PTHR23257:SF457 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  5551
Name:  ? Bradi2g46340 Secondary Identifier:  ? PAC:32780425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g46340 0.5kb upstream 0.5kb upstream 11552 true Bd2: 46568349-46579900 Brachypodium distachyon
Bradi2g46340 0.5kb upstream 0.5kb upstream 500 false Bd2: 46579401-46579900 Brachypodium distachyon
Bradi2g46340 0.5kb downstream 0.5kb downstream 11552 true Bd2: 46567849-46579400 Brachypodium distachyon
Bradi2g46340 0.5kb downstream 0.5kb downstream 500 false Bd2: 46567849-46568348 Brachypodium distachyon
Bradi2g46340 1.0kb upstream 1.0kb upstream 12052 true Bd2: 46568349-46580400 Brachypodium distachyon
Bradi2g46340 1.0kb upstream 1.0kb upstream 1000 false Bd2: 46579401-46580400 Brachypodium distachyon
Bradi2g46340 1.0kb downstream 1.0kb downstream 12052 true Bd2: 46567349-46579400 Brachypodium distachyon
Bradi2g46340 1.0kb downstream 1.0kb downstream 1000 false Bd2: 46567349-46568348 Brachypodium distachyon
Bradi2g46340 2.0kb upstream 2.0kb upstream 13052 true Bd2: 46568349-46581400 Brachypodium distachyon
Bradi2g46340 2.0kb upstream 2.0kb upstream 2000 false Bd2: 46579401-46581400 Brachypodium distachyon
Bradi2g46340 2.0kb downstream 2.0kb downstream 13052 true Bd2: 46566349-46579400 Brachypodium distachyon
Bradi2g46340 2.0kb downstream 2.0kb downstream 2000 false Bd2: 46566349-46568348 Brachypodium distachyon
Bradi2g46340 5.0kb upstream 5.0kb upstream 16052 true Bd2: 46568349-46584400 Brachypodium distachyon
Bradi2g46340 5.0kb upstream 5.0kb upstream 5000 false Bd2: 46579401-46584400 Brachypodium distachyon
Bradi2g46340 5.0kb downstream 5.0kb downstream 16052 true Bd2: 46563349-46579400 Brachypodium distachyon
Bradi2g46340 5.0kb downstream 5.0kb downstream 5000 false Bd2: 46563349-46568348 Brachypodium distachyon
Bradi2g46340 10.0kb upstream 10.0kb upstream 21052 true Bd2: 46568349-46589400 Brachypodium distachyon
Bradi2g46340 10.0kb upstream 10.0kb upstream 10000 false Bd2: 46579401-46589400 Brachypodium distachyon
Bradi2g46340 10.0kb downstream 10.0kb downstream 21052 true Bd2: 46558349-46579400 Brachypodium distachyon
Bradi2g46340 10.0kb downstream 10.0kb downstream 10000 false Bd2: 46558349-46568348 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580125 5269 Grass View MSA
122048343 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351351 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.285        
cufflinks 4.144        
cufflinks 3.977        
cufflinks 3.209        
cufflinks 1.753       Low
cufflinks 3.769        
cufflinks 3.55        
cufflinks 3.863        
cufflinks 3.647        
cufflinks 2.571        
cufflinks 3.526        
cufflinks 4.213        
cufflinks 3.429        
cufflinks 2.578        
cufflinks 3.244        
cufflinks 4.165        
cufflinks 2.209        
cufflinks 4.909       High
cufflinks 2.034        
cufflinks 0.593       Low
cufflinks 2.975        
cufflinks 4.585        
cufflinks 3.744        
cufflinks 3.495        
cufflinks 2.878        
cufflinks 3.665        
cufflinks 4.581        
cufflinks 3.276        
cufflinks 3.368        
cufflinks 4.553        

0 Strain