Gene : Bradi2g46350 B. distachyon v3.1
Defline:  (1 of 1) PTHR16517//PTHR16517:SF35 - TUBBY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  5553
Name:  ? Bradi2g46350 Secondary Identifier:  ? PAC:32773145
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g46350 0.5kb upstream 0.5kb upstream 7471 true Bd2: 46587758-46595228 Brachypodium distachyon
Bradi2g46350 0.5kb upstream 0.5kb upstream 500 false Bd2: 46594729-46595228 Brachypodium distachyon
Bradi2g46350 0.5kb downstream 0.5kb downstream 7471 true Bd2: 46587258-46594728 Brachypodium distachyon
Bradi2g46350 0.5kb downstream 0.5kb downstream 500 false Bd2: 46587258-46587757 Brachypodium distachyon
Bradi2g46350 1.0kb upstream 1.0kb upstream 7971 true Bd2: 46587758-46595728 Brachypodium distachyon
Bradi2g46350 1.0kb upstream 1.0kb upstream 1000 false Bd2: 46594729-46595728 Brachypodium distachyon
Bradi2g46350 1.0kb downstream 1.0kb downstream 7971 true Bd2: 46586758-46594728 Brachypodium distachyon
Bradi2g46350 1.0kb downstream 1.0kb downstream 1000 false Bd2: 46586758-46587757 Brachypodium distachyon
Bradi2g46350 2.0kb upstream 2.0kb upstream 8971 true Bd2: 46587758-46596728 Brachypodium distachyon
Bradi2g46350 2.0kb upstream 2.0kb upstream 2000 false Bd2: 46594729-46596728 Brachypodium distachyon
Bradi2g46350 2.0kb downstream 2.0kb downstream 8971 true Bd2: 46585758-46594728 Brachypodium distachyon
Bradi2g46350 2.0kb downstream 2.0kb downstream 2000 false Bd2: 46585758-46587757 Brachypodium distachyon
Bradi2g46350 5.0kb upstream 5.0kb upstream 11971 true Bd2: 46587758-46599728 Brachypodium distachyon
Bradi2g46350 5.0kb upstream 5.0kb upstream 5000 false Bd2: 46594729-46599728 Brachypodium distachyon
Bradi2g46350 5.0kb downstream 5.0kb downstream 11971 true Bd2: 46582758-46594728 Brachypodium distachyon
Bradi2g46350 5.0kb downstream 5.0kb downstream 5000 false Bd2: 46582758-46587757 Brachypodium distachyon
Bradi2g46350 10.0kb upstream 10.0kb upstream 16971 true Bd2: 46587758-46604728 Brachypodium distachyon
Bradi2g46350 10.0kb upstream 10.0kb upstream 10000 false Bd2: 46594729-46604728 Brachypodium distachyon
Bradi2g46350 10.0kb downstream 10.0kb downstream 16971 true Bd2: 46577758-46594728 Brachypodium distachyon
Bradi2g46350 10.0kb downstream 10.0kb downstream 10000 false Bd2: 46577758-46587757 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572891 5269 Grass View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.809        
cufflinks 1.368        
cufflinks 1.893        
cufflinks 1.487        
cufflinks 2.201        
cufflinks 1.11       Low
cufflinks 1.231       Low
cufflinks 1.279        
cufflinks 1.201       Low
cufflinks 2.262        
cufflinks 1.455        
cufflinks 1.844        
cufflinks 1.092       Low
cufflinks 0.909       Low
cufflinks 1.944        
cufflinks 1.191       Low
cufflinks 1.845        
cufflinks 2.993       High
cufflinks 4.11       High
cufflinks 2.223        
cufflinks 4.754       High
cufflinks 1.624        
cufflinks 1.321        
cufflinks 1.324        
cufflinks 1.413        
cufflinks 2.293        
cufflinks 1.184       Low
cufflinks 2.269        
cufflinks 2.004        
cufflinks 3.594       High

0 Strain