Gene : Bradi2g46650 B. distachyon v3.1
Defline:  (1 of 1) K08334 - beclin 1 (BECN1, VPS30, ATG6) Genomic Order:  5593
Name:  ? Bradi2g46650 Secondary Identifier:  ? PAC:32777609
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g46650 0.5kb upstream 0.5kb upstream 6686 true Bd2: 46843457-46850142 Brachypodium distachyon
Bradi2g46650 0.5kb upstream 0.5kb upstream 500 false Bd2: 46849643-46850142 Brachypodium distachyon
Bradi2g46650 0.5kb downstream 0.5kb downstream 6686 true Bd2: 46842957-46849642 Brachypodium distachyon
Bradi2g46650 0.5kb downstream 0.5kb downstream 500 false Bd2: 46842957-46843456 Brachypodium distachyon
Bradi2g46650 1.0kb upstream 1.0kb upstream 7186 true Bd2: 46843457-46850642 Brachypodium distachyon
Bradi2g46650 1.0kb upstream 1.0kb upstream 1000 false Bd2: 46849643-46850642 Brachypodium distachyon
Bradi2g46650 1.0kb downstream 1.0kb downstream 7186 true Bd2: 46842457-46849642 Brachypodium distachyon
Bradi2g46650 1.0kb downstream 1.0kb downstream 1000 false Bd2: 46842457-46843456 Brachypodium distachyon
Bradi2g46650 2.0kb upstream 2.0kb upstream 8186 true Bd2: 46843457-46851642 Brachypodium distachyon
Bradi2g46650 2.0kb upstream 2.0kb upstream 2000 false Bd2: 46849643-46851642 Brachypodium distachyon
Bradi2g46650 2.0kb downstream 2.0kb downstream 8186 true Bd2: 46841457-46849642 Brachypodium distachyon
Bradi2g46650 2.0kb downstream 2.0kb downstream 2000 false Bd2: 46841457-46843456 Brachypodium distachyon
Bradi2g46650 5.0kb upstream 5.0kb upstream 11186 true Bd2: 46843457-46854642 Brachypodium distachyon
Bradi2g46650 5.0kb upstream 5.0kb upstream 5000 false Bd2: 46849643-46854642 Brachypodium distachyon
Bradi2g46650 5.0kb downstream 5.0kb downstream 11186 true Bd2: 46838457-46849642 Brachypodium distachyon
Bradi2g46650 5.0kb downstream 5.0kb downstream 5000 false Bd2: 46838457-46843456 Brachypodium distachyon
Bradi2g46650 10.0kb upstream 10.0kb upstream 16186 true Bd2: 46843457-46859642 Brachypodium distachyon
Bradi2g46650 10.0kb upstream 10.0kb upstream 10000 false Bd2: 46849643-46859642 Brachypodium distachyon
Bradi2g46650 10.0kb downstream 10.0kb downstream 16186 true Bd2: 46833457-46849642 Brachypodium distachyon
Bradi2g46650 10.0kb downstream 10.0kb downstream 10000 false Bd2: 46833457-46843456 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586209 5269 Grass View MSA
122047778 5273 Angiosperm View MSA
121344553 5274 Embryophyte View MSA
123428819 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.587       Low
cufflinks 3.461        
cufflinks 5.549       High
cufflinks 3.012        
cufflinks 2.869        
cufflinks 3.454        
cufflinks 3.348        
cufflinks 3.202        
cufflinks 3.342        
cufflinks 5.835       High
cufflinks 5.904       High
cufflinks 3.761        
cufflinks 4.686        
cufflinks 4.424        
cufflinks 2.971        
cufflinks 3.595        
cufflinks 2.949        
cufflinks 4.677        
cufflinks 4.927        
cufflinks 2.655       Low
cufflinks 3.738        
cufflinks 6.841       High
cufflinks 3.279        
cufflinks 3.157        
cufflinks 3.081        
cufflinks 5.805       High
cufflinks 6.429       High
cufflinks 6.498       High
cufflinks 6.317       High
cufflinks 3.33        

0 Strain