Gene : Bradi4g36280 B. distachyon v3.1
Defline:  (1 of 2) PTHR10585//PTHR10585:SF35 - ER LUMEN PROTEIN RETAINING RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  4662
Name:  ? Bradi4g36280 Secondary Identifier:  ? PAC:32789653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g36280 0.5kb upstream 0.5kb upstream 5002 true Bd4: 41455886-41460887 Brachypodium distachyon
Bradi4g36280 0.5kb upstream 0.5kb upstream 500 false Bd4: 41455886-41456385 Brachypodium distachyon
Bradi4g36280 0.5kb downstream 0.5kb downstream 5002 true Bd4: 41456386-41461387 Brachypodium distachyon
Bradi4g36280 0.5kb downstream 0.5kb downstream 500 false Bd4: 41460888-41461387 Brachypodium distachyon
Bradi4g36280 1.0kb upstream 1.0kb upstream 5502 true Bd4: 41455386-41460887 Brachypodium distachyon
Bradi4g36280 1.0kb upstream 1.0kb upstream 1000 false Bd4: 41455386-41456385 Brachypodium distachyon
Bradi4g36280 1.0kb downstream 1.0kb downstream 5502 true Bd4: 41456386-41461887 Brachypodium distachyon
Bradi4g36280 1.0kb downstream 1.0kb downstream 1000 false Bd4: 41460888-41461887 Brachypodium distachyon
Bradi4g36280 2.0kb upstream 2.0kb upstream 6502 true Bd4: 41454386-41460887 Brachypodium distachyon
Bradi4g36280 2.0kb upstream 2.0kb upstream 2000 false Bd4: 41454386-41456385 Brachypodium distachyon
Bradi4g36280 2.0kb downstream 2.0kb downstream 6502 true Bd4: 41456386-41462887 Brachypodium distachyon
Bradi4g36280 2.0kb downstream 2.0kb downstream 2000 false Bd4: 41460888-41462887 Brachypodium distachyon
Bradi4g36280 5.0kb upstream 5.0kb upstream 9502 true Bd4: 41451386-41460887 Brachypodium distachyon
Bradi4g36280 5.0kb upstream 5.0kb upstream 5000 false Bd4: 41451386-41456385 Brachypodium distachyon
Bradi4g36280 5.0kb downstream 5.0kb downstream 9502 true Bd4: 41456386-41465887 Brachypodium distachyon
Bradi4g36280 5.0kb downstream 5.0kb downstream 5000 false Bd4: 41460888-41465887 Brachypodium distachyon
Bradi4g36280 10.0kb upstream 10.0kb upstream 14502 true Bd4: 41446386-41460887 Brachypodium distachyon
Bradi4g36280 10.0kb upstream 10.0kb upstream 10000 false Bd4: 41446386-41456385 Brachypodium distachyon
Bradi4g36280 10.0kb downstream 10.0kb downstream 14502 true Bd4: 41456386-41470887 Brachypodium distachyon
Bradi4g36280 10.0kb downstream 10.0kb downstream 10000 false Bd4: 41460888-41470887 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585975 5269 Grass View MSA
122049823 5273 Angiosperm View MSA
121349491 5274 Embryophyte View MSA
123426417 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.811        
cufflinks 10.308     High  
cufflinks 9.744        
cufflinks 11.818     High  
cufflinks 7.315        
cufflinks 9.098        
cufflinks 10.221     High  
cufflinks 7.834        
cufflinks 8.015        
cufflinks 10.511     High  
cufflinks 6.147       Low
cufflinks 7.284        
cufflinks 5.281       Low
cufflinks 5.511       Low
cufflinks 5.713       Low
cufflinks 8.425        
cufflinks 12.634     High  
cufflinks 12.997     High High
cufflinks 18.019     High High
cufflinks 4.296       Low
cufflinks 16.795     High High
cufflinks 8.061        
cufflinks 8.517        
cufflinks 8.81        
cufflinks 10.41     High  
cufflinks 10.708        
cufflinks 7.909        
cufflinks 11.062     High  
cufflinks 9.923        
cufflinks 12.772     High  

0 Strain