Gene : Bradi4g31030 B. distachyon v3.1
Defline:  (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) Genomic Order:  3993
Name:  ? Bradi4g31030 Secondary Identifier:  ? PAC:32788899
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7511 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g31030 0.5kb upstream 0.5kb upstream 5004 true Bd4: 36661586-36666589 Brachypodium distachyon
Bradi4g31030 0.5kb upstream 0.5kb upstream 500 false Bd4: 36666090-36666589 Brachypodium distachyon
Bradi4g31030 0.5kb downstream 0.5kb downstream 5004 true Bd4: 36661086-36666089 Brachypodium distachyon
Bradi4g31030 0.5kb downstream 0.5kb downstream 500 false Bd4: 36661086-36661585 Brachypodium distachyon
Bradi4g31030 1.0kb upstream 1.0kb upstream 5504 true Bd4: 36661586-36667089 Brachypodium distachyon
Bradi4g31030 1.0kb upstream 1.0kb upstream 1000 false Bd4: 36666090-36667089 Brachypodium distachyon
Bradi4g31030 1.0kb downstream 1.0kb downstream 5504 true Bd4: 36660586-36666089 Brachypodium distachyon
Bradi4g31030 1.0kb downstream 1.0kb downstream 1000 false Bd4: 36660586-36661585 Brachypodium distachyon
Bradi4g31030 2.0kb upstream 2.0kb upstream 6504 true Bd4: 36661586-36668089 Brachypodium distachyon
Bradi4g31030 2.0kb upstream 2.0kb upstream 2000 false Bd4: 36666090-36668089 Brachypodium distachyon
Bradi4g31030 2.0kb downstream 2.0kb downstream 6504 true Bd4: 36659586-36666089 Brachypodium distachyon
Bradi4g31030 2.0kb downstream 2.0kb downstream 2000 false Bd4: 36659586-36661585 Brachypodium distachyon
Bradi4g31030 5.0kb upstream 5.0kb upstream 9504 true Bd4: 36661586-36671089 Brachypodium distachyon
Bradi4g31030 5.0kb upstream 5.0kb upstream 5000 false Bd4: 36666090-36671089 Brachypodium distachyon
Bradi4g31030 5.0kb downstream 5.0kb downstream 9504 true Bd4: 36656586-36666089 Brachypodium distachyon
Bradi4g31030 5.0kb downstream 5.0kb downstream 5000 false Bd4: 36656586-36661585 Brachypodium distachyon
Bradi4g31030 10.0kb upstream 10.0kb upstream 14504 true Bd4: 36661586-36676089 Brachypodium distachyon
Bradi4g31030 10.0kb upstream 10.0kb upstream 10000 false Bd4: 36666090-36676089 Brachypodium distachyon
Bradi4g31030 10.0kb downstream 10.0kb downstream 14504 true Bd4: 36651586-36666089 Brachypodium distachyon
Bradi4g31030 10.0kb downstream 10.0kb downstream 10000 false Bd4: 36651586-36661585 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
124571949 5269 Grass View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.649     High  
cufflinks 8.11       Low
cufflinks 8.583       Low
cufflinks 7.63       Low
cufflinks 15.384     High  
cufflinks 11.749     High  
cufflinks 10.746     High  
cufflinks 12.263     High  
cufflinks 12.209     High  
cufflinks 12.713     High  
cufflinks 26.465     High High
cufflinks 11.151     High  
cufflinks 17.47     High  
cufflinks 19.433     High High
cufflinks 14.526     High  
cufflinks 10.604     High  
cufflinks 16.648     High  
cufflinks 7.335       Low
cufflinks 23.873     High High
cufflinks 28.785     High High
cufflinks 9.938        
cufflinks 10.18     High  
cufflinks 12.188     High  
cufflinks 13.291     High  
cufflinks 12.601     High  
cufflinks 8.06       Low
cufflinks 21.939     High High
cufflinks 9.604        
cufflinks 8.822        
cufflinks 7.11       Low

0 Strain