Gene : Bradi2g47076 B. distachyon v3.1
Defline:  (1 of 2) PTHR10994:SF85 - RETICULON-LIKE PROTEIN B14-RELATED Genomic Order:  5645
Name:  ? Bradi2g47076 Secondary Identifier:  ? PAC:32782526
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g47076 0.5kb upstream 0.5kb upstream 2217 true Bd2: 47204384-47206600 Brachypodium distachyon
Bradi2g47076 0.5kb upstream 0.5kb upstream 500 false Bd2: 47204384-47204883 Brachypodium distachyon
Bradi2g47076 0.5kb downstream 0.5kb downstream 2217 true Bd2: 47204884-47207100 Brachypodium distachyon
Bradi2g47076 0.5kb downstream 0.5kb downstream 500 false Bd2: 47206601-47207100 Brachypodium distachyon
Bradi2g47076 1.0kb upstream 1.0kb upstream 2717 true Bd2: 47203884-47206600 Brachypodium distachyon
Bradi2g47076 1.0kb upstream 1.0kb upstream 1000 false Bd2: 47203884-47204883 Brachypodium distachyon
Bradi2g47076 1.0kb downstream 1.0kb downstream 2717 true Bd2: 47204884-47207600 Brachypodium distachyon
Bradi2g47076 1.0kb downstream 1.0kb downstream 1000 false Bd2: 47206601-47207600 Brachypodium distachyon
Bradi2g47076 2.0kb upstream 2.0kb upstream 3717 true Bd2: 47202884-47206600 Brachypodium distachyon
Bradi2g47076 2.0kb upstream 2.0kb upstream 2000 false Bd2: 47202884-47204883 Brachypodium distachyon
Bradi2g47076 2.0kb downstream 2.0kb downstream 3717 true Bd2: 47204884-47208600 Brachypodium distachyon
Bradi2g47076 2.0kb downstream 2.0kb downstream 2000 false Bd2: 47206601-47208600 Brachypodium distachyon
Bradi2g47076 5.0kb upstream 5.0kb upstream 6717 true Bd2: 47199884-47206600 Brachypodium distachyon
Bradi2g47076 5.0kb upstream 5.0kb upstream 5000 false Bd2: 47199884-47204883 Brachypodium distachyon
Bradi2g47076 5.0kb downstream 5.0kb downstream 6717 true Bd2: 47204884-47211600 Brachypodium distachyon
Bradi2g47076 5.0kb downstream 5.0kb downstream 5000 false Bd2: 47206601-47211600 Brachypodium distachyon
Bradi2g47076 10.0kb upstream 10.0kb upstream 11717 true Bd2: 47194884-47206600 Brachypodium distachyon
Bradi2g47076 10.0kb upstream 10.0kb upstream 10000 false Bd2: 47194884-47204883 Brachypodium distachyon
Bradi2g47076 10.0kb downstream 10.0kb downstream 11717 true Bd2: 47204884-47216600 Brachypodium distachyon
Bradi2g47076 10.0kb downstream 10.0kb downstream 10000 false Bd2: 47206601-47216600 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581377 5269 Grass View MSA
122048457 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.41        
cufflinks 0.474        
cufflinks 0.464        
cufflinks 0.278        
cufflinks 0.559        
cufflinks 0.333        
cufflinks 0.393        
cufflinks 0.413        
cufflinks 0.338        
cufflinks 0.686        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.426        
cufflinks 0.087       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.314        
cufflinks 0.435        
cufflinks 0.25        
cufflinks 1.927       High
cufflinks 0.194     Low Low
cufflinks 1.352       High
cufflinks 1.345       High
cufflinks 0.426        
cufflinks 0.279        
cufflinks 0.309        
cufflinks 0.384        
cufflinks 0.634        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.544        
cufflinks 0.48        
cufflinks 1.606       High

0 Strain