Gene : Bradi2g47387 B. distachyon v3.1
Defline:  (1 of 1) PTHR11003//PTHR11003:SF140 - POTASSIUM CHANNEL, SUBFAMILY K Genomic Order:  5694
Name:  ? Bradi2g47387 Secondary Identifier:  ? PAC:32780776
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g47387 0.5kb upstream 0.5kb upstream 2387 true Bd2: 47513628-47516014 Brachypodium distachyon
Bradi2g47387 0.5kb upstream 0.5kb upstream 500 false Bd2: 47515515-47516014 Brachypodium distachyon
Bradi2g47387 0.5kb downstream 0.5kb downstream 2387 true Bd2: 47513128-47515514 Brachypodium distachyon
Bradi2g47387 0.5kb downstream 0.5kb downstream 500 false Bd2: 47513128-47513627 Brachypodium distachyon
Bradi2g47387 1.0kb upstream 1.0kb upstream 2887 true Bd2: 47513628-47516514 Brachypodium distachyon
Bradi2g47387 1.0kb upstream 1.0kb upstream 1000 false Bd2: 47515515-47516514 Brachypodium distachyon
Bradi2g47387 1.0kb downstream 1.0kb downstream 2887 true Bd2: 47512628-47515514 Brachypodium distachyon
Bradi2g47387 1.0kb downstream 1.0kb downstream 1000 false Bd2: 47512628-47513627 Brachypodium distachyon
Bradi2g47387 2.0kb upstream 2.0kb upstream 3887 true Bd2: 47513628-47517514 Brachypodium distachyon
Bradi2g47387 2.0kb upstream 2.0kb upstream 2000 false Bd2: 47515515-47517514 Brachypodium distachyon
Bradi2g47387 2.0kb downstream 2.0kb downstream 3887 true Bd2: 47511628-47515514 Brachypodium distachyon
Bradi2g47387 2.0kb downstream 2.0kb downstream 2000 false Bd2: 47511628-47513627 Brachypodium distachyon
Bradi2g47387 5.0kb upstream 5.0kb upstream 6887 true Bd2: 47513628-47520514 Brachypodium distachyon
Bradi2g47387 5.0kb upstream 5.0kb upstream 5000 false Bd2: 47515515-47520514 Brachypodium distachyon
Bradi2g47387 5.0kb downstream 5.0kb downstream 6887 true Bd2: 47508628-47515514 Brachypodium distachyon
Bradi2g47387 5.0kb downstream 5.0kb downstream 5000 false Bd2: 47508628-47513627 Brachypodium distachyon
Bradi2g47387 10.0kb upstream 10.0kb upstream 11887 true Bd2: 47513628-47525514 Brachypodium distachyon
Bradi2g47387 10.0kb upstream 10.0kb upstream 10000 false Bd2: 47515515-47525514 Brachypodium distachyon
Bradi2g47387 10.0kb downstream 10.0kb downstream 11887 true Bd2: 47503628-47515514 Brachypodium distachyon
Bradi2g47387 10.0kb downstream 10.0kb downstream 10000 false Bd2: 47503628-47513627 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582081 5269 Grass View MSA
122049994 5273 Angiosperm View MSA
121311677 5274 Embryophyte View MSA
123348942 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.625        
cufflinks 0.711        
cufflinks 0.659        
cufflinks 0.676        
cufflinks 1.175        
cufflinks 1.026        
cufflinks 0.722        
cufflinks 1.036        
cufflinks 0.973        
cufflinks 1.376        
cufflinks 1.377        
cufflinks 1.534        
cufflinks 1.713        
cufflinks 1.656        
cufflinks 1.353        
cufflinks 1.028        
cufflinks 1.902        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.246       Low
cufflinks 1.58        
cufflinks 1.321        
cufflinks 1.256        
cufflinks 0.467       Low
cufflinks 1.132        
cufflinks 0.675        
cufflinks 0.91        
cufflinks 3.769       High
cufflinks 0.754        
cufflinks 0.638        
cufflinks 0.861        

0 Strain