Gene : Bradi2g51727 B. distachyon v3.1
Defline:  (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  6218
Name:  ? Bradi2g51727 Secondary Identifier:  ? PAC:32777584
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g51727 0.5kb upstream 0.5kb upstream 11586 true Bd2: 51100476-51112061 Brachypodium distachyon
Bradi2g51727 0.5kb upstream 0.5kb upstream 500 false Bd2: 51111562-51112061 Brachypodium distachyon
Bradi2g51727 0.5kb downstream 0.5kb downstream 11586 true Bd2: 51099976-51111561 Brachypodium distachyon
Bradi2g51727 0.5kb downstream 0.5kb downstream 500 false Bd2: 51099976-51100475 Brachypodium distachyon
Bradi2g51727 1.0kb upstream 1.0kb upstream 12086 true Bd2: 51100476-51112561 Brachypodium distachyon
Bradi2g51727 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51111562-51112561 Brachypodium distachyon
Bradi2g51727 1.0kb downstream 1.0kb downstream 12086 true Bd2: 51099476-51111561 Brachypodium distachyon
Bradi2g51727 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51099476-51100475 Brachypodium distachyon
Bradi2g51727 2.0kb upstream 2.0kb upstream 13086 true Bd2: 51100476-51113561 Brachypodium distachyon
Bradi2g51727 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51111562-51113561 Brachypodium distachyon
Bradi2g51727 2.0kb downstream 2.0kb downstream 13086 true Bd2: 51098476-51111561 Brachypodium distachyon
Bradi2g51727 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51098476-51100475 Brachypodium distachyon
Bradi2g51727 5.0kb upstream 5.0kb upstream 16086 true Bd2: 51100476-51116561 Brachypodium distachyon
Bradi2g51727 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51111562-51116561 Brachypodium distachyon
Bradi2g51727 5.0kb downstream 5.0kb downstream 16086 true Bd2: 51095476-51111561 Brachypodium distachyon
Bradi2g51727 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51095476-51100475 Brachypodium distachyon
Bradi2g51727 10.0kb upstream 10.0kb upstream 21086 true Bd2: 51100476-51121561 Brachypodium distachyon
Bradi2g51727 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51111562-51121561 Brachypodium distachyon
Bradi2g51727 10.0kb downstream 10.0kb downstream 21086 true Bd2: 51090476-51111561 Brachypodium distachyon
Bradi2g51727 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51090476-51100475 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573334 5269 Grass View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.979        
cufflinks 3.748        
cufflinks 3.981        
cufflinks 2.822        
cufflinks 3.733        
cufflinks 3.231        
cufflinks 2.905        
cufflinks 3.18        
cufflinks 3.264        
cufflinks 2.29        
cufflinks 5.075       High
cufflinks 4.561        
cufflinks 3.517        
cufflinks 3.219        
cufflinks 3.508        
cufflinks 3.388        
cufflinks 1.571       Low
cufflinks 4.526        
cufflinks 5.278       High
cufflinks 4.959       High
cufflinks 1.826       Low
cufflinks 4.262        
cufflinks 2.906        
cufflinks 2.866        
cufflinks 2.552        
cufflinks 3.572        
cufflinks 4.478        
cufflinks 3.425        
cufflinks 3.663        
cufflinks 3.183        

0 Strain