Gene : Bradi2g51790 B. distachyon v3.1
Defline:  (1 of 1) PTHR34053:SF1 - PROTEIN ULTRAPETALA 1-RELATED Genomic Order:  6226
Name:  ? Bradi2g51790 Secondary Identifier:  ? PAC:32775450
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g51790 0.5kb upstream 0.5kb upstream 4593 true Bd2: 51159058-51163650 Brachypodium distachyon
Bradi2g51790 0.5kb upstream 0.5kb upstream 500 false Bd2: 51163151-51163650 Brachypodium distachyon
Bradi2g51790 0.5kb downstream 0.5kb downstream 4593 true Bd2: 51158558-51163150 Brachypodium distachyon
Bradi2g51790 0.5kb downstream 0.5kb downstream 500 false Bd2: 51158558-51159057 Brachypodium distachyon
Bradi2g51790 1.0kb upstream 1.0kb upstream 5093 true Bd2: 51159058-51164150 Brachypodium distachyon
Bradi2g51790 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51163151-51164150 Brachypodium distachyon
Bradi2g51790 1.0kb downstream 1.0kb downstream 5093 true Bd2: 51158058-51163150 Brachypodium distachyon
Bradi2g51790 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51158058-51159057 Brachypodium distachyon
Bradi2g51790 2.0kb upstream 2.0kb upstream 6093 true Bd2: 51159058-51165150 Brachypodium distachyon
Bradi2g51790 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51163151-51165150 Brachypodium distachyon
Bradi2g51790 2.0kb downstream 2.0kb downstream 6093 true Bd2: 51157058-51163150 Brachypodium distachyon
Bradi2g51790 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51157058-51159057 Brachypodium distachyon
Bradi2g51790 5.0kb upstream 5.0kb upstream 9093 true Bd2: 51159058-51168150 Brachypodium distachyon
Bradi2g51790 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51163151-51168150 Brachypodium distachyon
Bradi2g51790 5.0kb downstream 5.0kb downstream 9093 true Bd2: 51154058-51163150 Brachypodium distachyon
Bradi2g51790 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51154058-51159057 Brachypodium distachyon
Bradi2g51790 10.0kb upstream 10.0kb upstream 14093 true Bd2: 51159058-51173150 Brachypodium distachyon
Bradi2g51790 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51163151-51173150 Brachypodium distachyon
Bradi2g51790 10.0kb downstream 10.0kb downstream 14093 true Bd2: 51149058-51163150 Brachypodium distachyon
Bradi2g51790 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51149058-51159057 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571679 5269 Grass View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain