Gene : Bradi2g52090 B. distachyon v3.1
Defline:  (1 of 1) PTHR11474//PTHR11474:SF35 - TYROSINASE // SUBFAMILY NOT NAMED Genomic Order:  6260
Name:  ? Bradi2g52090 Secondary Identifier:  ? PAC:32778000
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6752 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52090 0.5kb upstream 0.5kb upstream 2535 true Bd2: 51374039-51376573 Brachypodium distachyon
Bradi2g52090 0.5kb upstream 0.5kb upstream 500 false Bd2: 51376074-51376573 Brachypodium distachyon
Bradi2g52090 0.5kb downstream 0.5kb downstream 2535 true Bd2: 51373539-51376073 Brachypodium distachyon
Bradi2g52090 0.5kb downstream 0.5kb downstream 500 false Bd2: 51373539-51374038 Brachypodium distachyon
Bradi2g52090 1.0kb upstream 1.0kb upstream 3035 true Bd2: 51374039-51377073 Brachypodium distachyon
Bradi2g52090 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51376074-51377073 Brachypodium distachyon
Bradi2g52090 1.0kb downstream 1.0kb downstream 3035 true Bd2: 51373039-51376073 Brachypodium distachyon
Bradi2g52090 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51373039-51374038 Brachypodium distachyon
Bradi2g52090 2.0kb upstream 2.0kb upstream 4035 true Bd2: 51374039-51378073 Brachypodium distachyon
Bradi2g52090 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51376074-51378073 Brachypodium distachyon
Bradi2g52090 2.0kb downstream 2.0kb downstream 4035 true Bd2: 51372039-51376073 Brachypodium distachyon
Bradi2g52090 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51372039-51374038 Brachypodium distachyon
Bradi2g52090 5.0kb upstream 5.0kb upstream 7035 true Bd2: 51374039-51381073 Brachypodium distachyon
Bradi2g52090 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51376074-51381073 Brachypodium distachyon
Bradi2g52090 5.0kb downstream 5.0kb downstream 7035 true Bd2: 51369039-51376073 Brachypodium distachyon
Bradi2g52090 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51369039-51374038 Brachypodium distachyon
Bradi2g52090 10.0kb upstream 10.0kb upstream 12035 true Bd2: 51374039-51386073 Brachypodium distachyon
Bradi2g52090 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51376074-51386073 Brachypodium distachyon
Bradi2g52090 10.0kb downstream 10.0kb downstream 12035 true Bd2: 51364039-51376073 Brachypodium distachyon
Bradi2g52090 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51364039-51374038 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994851 5273 Angiosperm View MSA
124585862 5269 Grass View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.097        
cufflinks 4.855        
cufflinks 8.097        
cufflinks 4.933        
cufflinks 34.543     High High
cufflinks 6.18        
cufflinks 4.988        
cufflinks 16.786     High  
cufflinks 7.369        
cufflinks 6.441        
cufflinks 0.133       Low
cufflinks 12.477     High  
cufflinks 1.475        
cufflinks 0.104       Low
cufflinks 18.786     High  
cufflinks 5.379        
cufflinks 7.148        
cufflinks 14.549     High  
cufflinks 16.286     High  
cufflinks 1.208        
cufflinks 0.466       Low
cufflinks 7.191        
cufflinks 13.368     High  
cufflinks 9.486     High  
cufflinks 5.778        
cufflinks 7.345        
cufflinks 0.085     Low Low
cufflinks 7.663        
cufflinks 7.56        
cufflinks 10.838        

0 Strain