Gene : Bradi2g52260 B. distachyon v3.1
Defline:  (1 of 2) 1.14.18.1 - Tyrosinase / Tyrosine-dopa oxidase Genomic Order:  6279
Name:  ? Bradi2g52260 Secondary Identifier:  ? PAC:32773563
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6481 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52260 0.5kb upstream 0.5kb upstream 2854 true Bd2: 51464125-51466978 Brachypodium distachyon
Bradi2g52260 0.5kb upstream 0.5kb upstream 500 false Bd2: 51466479-51466978 Brachypodium distachyon
Bradi2g52260 0.5kb downstream 0.5kb downstream 2854 true Bd2: 51463625-51466478 Brachypodium distachyon
Bradi2g52260 0.5kb downstream 0.5kb downstream 500 false Bd2: 51463625-51464124 Brachypodium distachyon
Bradi2g52260 1.0kb upstream 1.0kb upstream 3354 true Bd2: 51464125-51467478 Brachypodium distachyon
Bradi2g52260 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51466479-51467478 Brachypodium distachyon
Bradi2g52260 1.0kb downstream 1.0kb downstream 3354 true Bd2: 51463125-51466478 Brachypodium distachyon
Bradi2g52260 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51463125-51464124 Brachypodium distachyon
Bradi2g52260 2.0kb upstream 2.0kb upstream 4354 true Bd2: 51464125-51468478 Brachypodium distachyon
Bradi2g52260 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51466479-51468478 Brachypodium distachyon
Bradi2g52260 2.0kb downstream 2.0kb downstream 4354 true Bd2: 51462125-51466478 Brachypodium distachyon
Bradi2g52260 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51462125-51464124 Brachypodium distachyon
Bradi2g52260 5.0kb upstream 5.0kb upstream 7354 true Bd2: 51464125-51471478 Brachypodium distachyon
Bradi2g52260 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51466479-51471478 Brachypodium distachyon
Bradi2g52260 5.0kb downstream 5.0kb downstream 7354 true Bd2: 51459125-51466478 Brachypodium distachyon
Bradi2g52260 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51459125-51464124 Brachypodium distachyon
Bradi2g52260 10.0kb upstream 10.0kb upstream 12354 true Bd2: 51464125-51476478 Brachypodium distachyon
Bradi2g52260 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51466479-51476478 Brachypodium distachyon
Bradi2g52260 10.0kb downstream 10.0kb downstream 12354 true Bd2: 51454125-51466478 Brachypodium distachyon
Bradi2g52260 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51454125-51464124 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994851 5273 Angiosperm View MSA
124585862 5269 Grass View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.747     High High
cufflinks 4.22        
cufflinks 4.278        
cufflinks 8.494        
cufflinks 12.146     High  
cufflinks 3.006        
cufflinks 2.655        
cufflinks 14.416     High  
cufflinks 5.46        
cufflinks 7.463        
cufflinks 1.569        
cufflinks 4.713        
cufflinks 3.058        
cufflinks 2.217        
cufflinks 31.576     High High
cufflinks 1.894        
cufflinks 6.286        
cufflinks 0.055     Low Low
cufflinks 6.478        
cufflinks 6.657        
cufflinks 0.077     Low Low
cufflinks 10.153     High  
cufflinks 19.062     High High
cufflinks 8.319        
cufflinks 3.529        
cufflinks 5.123        
cufflinks 0.833       Low
cufflinks 6.628        
cufflinks 10.785        
cufflinks 2.891        

0 Strain