Gene : Bradi2g52350 B. distachyon v3.1
Defline:  (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD Genomic Order:  6289
Name:  ? Bradi2g52350 Secondary Identifier:  ? PAC:32772439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52350 0.5kb upstream 0.5kb upstream 3186 true Bd2: 51515391-51518576 Brachypodium distachyon
Bradi2g52350 0.5kb upstream 0.5kb upstream 500 false Bd2: 51515391-51515890 Brachypodium distachyon
Bradi2g52350 0.5kb downstream 0.5kb downstream 3186 true Bd2: 51515891-51519076 Brachypodium distachyon
Bradi2g52350 0.5kb downstream 0.5kb downstream 500 false Bd2: 51518577-51519076 Brachypodium distachyon
Bradi2g52350 1.0kb upstream 1.0kb upstream 3686 true Bd2: 51514891-51518576 Brachypodium distachyon
Bradi2g52350 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51514891-51515890 Brachypodium distachyon
Bradi2g52350 1.0kb downstream 1.0kb downstream 3686 true Bd2: 51515891-51519576 Brachypodium distachyon
Bradi2g52350 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51518577-51519576 Brachypodium distachyon
Bradi2g52350 2.0kb upstream 2.0kb upstream 4686 true Bd2: 51513891-51518576 Brachypodium distachyon
Bradi2g52350 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51513891-51515890 Brachypodium distachyon
Bradi2g52350 2.0kb downstream 2.0kb downstream 4686 true Bd2: 51515891-51520576 Brachypodium distachyon
Bradi2g52350 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51518577-51520576 Brachypodium distachyon
Bradi2g52350 5.0kb upstream 5.0kb upstream 7686 true Bd2: 51510891-51518576 Brachypodium distachyon
Bradi2g52350 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51510891-51515890 Brachypodium distachyon
Bradi2g52350 5.0kb downstream 5.0kb downstream 7686 true Bd2: 51515891-51523576 Brachypodium distachyon
Bradi2g52350 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51518577-51523576 Brachypodium distachyon
Bradi2g52350 10.0kb upstream 10.0kb upstream 12686 true Bd2: 51505891-51518576 Brachypodium distachyon
Bradi2g52350 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51505891-51515890 Brachypodium distachyon
Bradi2g52350 10.0kb downstream 10.0kb downstream 12686 true Bd2: 51515891-51528576 Brachypodium distachyon
Bradi2g52350 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51518577-51528576 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570909 5269 Grass View MSA
122042750 5273 Angiosperm View MSA
121344136 5274 Embryophyte View MSA
123426191 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.566        
cufflinks 5.53        
cufflinks 6.45        
cufflinks 6.992        
cufflinks 7.117        
cufflinks 4.955        
cufflinks 5.451        
cufflinks 5.824        
cufflinks 5.932        
cufflinks 6.71        
cufflinks 6.473        
cufflinks 4.842        
cufflinks 4.039       Low
cufflinks 4.888        
cufflinks 4.836        
cufflinks 4.932        
cufflinks 7.817        
cufflinks 12.267     High High
cufflinks 22.505     High High
cufflinks 20.513     High High
cufflinks 14.466     High High
cufflinks 4.989        
cufflinks 5.963        
cufflinks 5.744        
cufflinks 5.622        
cufflinks 7.549        
cufflinks 5.958        
cufflinks 7.545        
cufflinks 6.113        
cufflinks 8.246        

0 Strain