Gene : Bradi4g19975 B. distachyon v3.1
Defline:  (1 of 1) PTHR11097:SF9 - EXOSOME COMPLEX COMPONENT RRP43 Genomic Order:  2550
Name:  ? Bradi4g19975 Secondary Identifier:  ? PAC:32784132
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g19975 0.5kb upstream 0.5kb upstream 5998 true Bd4: 22883792-22889789 Brachypodium distachyon
Bradi4g19975 0.5kb upstream 0.5kb upstream 500 false Bd4: 22889290-22889789 Brachypodium distachyon
Bradi4g19975 0.5kb downstream 0.5kb downstream 5998 true Bd4: 22883292-22889289 Brachypodium distachyon
Bradi4g19975 0.5kb downstream 0.5kb downstream 500 false Bd4: 22883292-22883791 Brachypodium distachyon
Bradi4g19975 1.0kb upstream 1.0kb upstream 6498 true Bd4: 22883792-22890289 Brachypodium distachyon
Bradi4g19975 1.0kb upstream 1.0kb upstream 1000 false Bd4: 22889290-22890289 Brachypodium distachyon
Bradi4g19975 1.0kb downstream 1.0kb downstream 6498 true Bd4: 22882792-22889289 Brachypodium distachyon
Bradi4g19975 1.0kb downstream 1.0kb downstream 1000 false Bd4: 22882792-22883791 Brachypodium distachyon
Bradi4g19975 2.0kb upstream 2.0kb upstream 7498 true Bd4: 22883792-22891289 Brachypodium distachyon
Bradi4g19975 2.0kb upstream 2.0kb upstream 2000 false Bd4: 22889290-22891289 Brachypodium distachyon
Bradi4g19975 2.0kb downstream 2.0kb downstream 7498 true Bd4: 22881792-22889289 Brachypodium distachyon
Bradi4g19975 2.0kb downstream 2.0kb downstream 2000 false Bd4: 22881792-22883791 Brachypodium distachyon
Bradi4g19975 5.0kb upstream 5.0kb upstream 10498 true Bd4: 22883792-22894289 Brachypodium distachyon
Bradi4g19975 5.0kb upstream 5.0kb upstream 5000 false Bd4: 22889290-22894289 Brachypodium distachyon
Bradi4g19975 5.0kb downstream 5.0kb downstream 10498 true Bd4: 22878792-22889289 Brachypodium distachyon
Bradi4g19975 5.0kb downstream 5.0kb downstream 5000 false Bd4: 22878792-22883791 Brachypodium distachyon
Bradi4g19975 10.0kb upstream 10.0kb upstream 15498 true Bd4: 22883792-22899289 Brachypodium distachyon
Bradi4g19975 10.0kb upstream 10.0kb upstream 10000 false Bd4: 22889290-22899289 Brachypodium distachyon
Bradi4g19975 10.0kb downstream 10.0kb downstream 15498 true Bd4: 22873792-22889289 Brachypodium distachyon
Bradi4g19975 10.0kb downstream 10.0kb downstream 10000 false Bd4: 22873792-22883791 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041221 5273 Angiosperm View MSA
124579202 5269 Grass View MSA
121346499 5274 Embryophyte View MSA
123425842 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.783        
cufflinks 3.333        
cufflinks 1.963        
cufflinks 3.078        
cufflinks 1.233        
cufflinks 2.31        
cufflinks 2.967        
cufflinks 1.808        
cufflinks 1.989        
cufflinks 1.492        
cufflinks 0.902        
cufflinks 1.554        
cufflinks 0.467       Low
cufflinks 0.674       Low
cufflinks 0.699       Low
cufflinks 2.79        
cufflinks 3.71       High
cufflinks 4.676       High
cufflinks 3.16        
cufflinks 0.687       Low
cufflinks 2.657        
cufflinks 1.413        
cufflinks 1.588        
cufflinks 1.887        
cufflinks 3.187        
cufflinks 1.503        
cufflinks 0.802       Low
cufflinks 1.299        
cufflinks 1.297        
cufflinks 2.639        

0 Strain