Gene : Bradi2g52580 B. distachyon v3.1
Defline:  (1 of 1) PTHR21133:SF2 - NEUGRIN-LIKE PROTEIN DDB_G0288135-RELATED Genomic Order:  6319
Name:  ? Bradi2g52580 Secondary Identifier:  ? PAC:32773890
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52580 0.5kb upstream 0.5kb upstream 3458 true Bd2: 51699569-51703026 Brachypodium distachyon
Bradi2g52580 0.5kb upstream 0.5kb upstream 500 false Bd2: 51702527-51703026 Brachypodium distachyon
Bradi2g52580 0.5kb downstream 0.5kb downstream 3458 true Bd2: 51699069-51702526 Brachypodium distachyon
Bradi2g52580 0.5kb downstream 0.5kb downstream 500 false Bd2: 51699069-51699568 Brachypodium distachyon
Bradi2g52580 1.0kb upstream 1.0kb upstream 3958 true Bd2: 51699569-51703526 Brachypodium distachyon
Bradi2g52580 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51702527-51703526 Brachypodium distachyon
Bradi2g52580 1.0kb downstream 1.0kb downstream 3958 true Bd2: 51698569-51702526 Brachypodium distachyon
Bradi2g52580 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51698569-51699568 Brachypodium distachyon
Bradi2g52580 2.0kb upstream 2.0kb upstream 4958 true Bd2: 51699569-51704526 Brachypodium distachyon
Bradi2g52580 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51702527-51704526 Brachypodium distachyon
Bradi2g52580 2.0kb downstream 2.0kb downstream 4958 true Bd2: 51697569-51702526 Brachypodium distachyon
Bradi2g52580 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51697569-51699568 Brachypodium distachyon
Bradi2g52580 5.0kb upstream 5.0kb upstream 7958 true Bd2: 51699569-51707526 Brachypodium distachyon
Bradi2g52580 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51702527-51707526 Brachypodium distachyon
Bradi2g52580 5.0kb downstream 5.0kb downstream 7958 true Bd2: 51694569-51702526 Brachypodium distachyon
Bradi2g52580 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51694569-51699568 Brachypodium distachyon
Bradi2g52580 10.0kb upstream 10.0kb upstream 12958 true Bd2: 51699569-51712526 Brachypodium distachyon
Bradi2g52580 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51702527-51712526 Brachypodium distachyon
Bradi2g52580 10.0kb downstream 10.0kb downstream 12958 true Bd2: 51689569-51702526 Brachypodium distachyon
Bradi2g52580 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51689569-51699568 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584864 5269 Grass View MSA
122047506 5273 Angiosperm View MSA
121349473 5274 Embryophyte View MSA
123424597 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.18     High  
cufflinks 12.3     High  
cufflinks 9.951        
cufflinks 13.484     High  
cufflinks 7.036        
cufflinks 10.531     High  
cufflinks 11.846     High  
cufflinks 9.09        
cufflinks 9.734     High  
cufflinks 7.945        
cufflinks 3.044       Low
cufflinks 8.083        
cufflinks 2.659       Low
cufflinks 3.892       Low
cufflinks 6.992        
cufflinks 9.897     High  
cufflinks 13.189     High  
cufflinks 17.232     High High
cufflinks 11.673        
cufflinks 6.826        
cufflinks 11.48     High  
cufflinks 8.043        
cufflinks 8.596        
cufflinks 9.211        
cufflinks 11.799     High  
cufflinks 9.332        
cufflinks 3.981       Low
cufflinks 8.282        
cufflinks 6.982        
cufflinks 14.835     High High

0 Strain