Gene : Bradi2g52650 B. distachyon v3.1
Defline:  (1 of 3) K03553 - recombination protein RecA (recA) Genomic Order:  6327
Name:  ? Bradi2g52650 Secondary Identifier:  ? PAC:32776048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52650 0.5kb upstream 0.5kb upstream 3856 true Bd2: 51737688-51741543 Brachypodium distachyon
Bradi2g52650 0.5kb upstream 0.5kb upstream 500 false Bd2: 51737688-51738187 Brachypodium distachyon
Bradi2g52650 0.5kb downstream 0.5kb downstream 3856 true Bd2: 51738188-51742043 Brachypodium distachyon
Bradi2g52650 0.5kb downstream 0.5kb downstream 500 false Bd2: 51741544-51742043 Brachypodium distachyon
Bradi2g52650 1.0kb upstream 1.0kb upstream 4356 true Bd2: 51737188-51741543 Brachypodium distachyon
Bradi2g52650 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51737188-51738187 Brachypodium distachyon
Bradi2g52650 1.0kb downstream 1.0kb downstream 4356 true Bd2: 51738188-51742543 Brachypodium distachyon
Bradi2g52650 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51741544-51742543 Brachypodium distachyon
Bradi2g52650 2.0kb upstream 2.0kb upstream 5356 true Bd2: 51736188-51741543 Brachypodium distachyon
Bradi2g52650 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51736188-51738187 Brachypodium distachyon
Bradi2g52650 2.0kb downstream 2.0kb downstream 5356 true Bd2: 51738188-51743543 Brachypodium distachyon
Bradi2g52650 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51741544-51743543 Brachypodium distachyon
Bradi2g52650 5.0kb upstream 5.0kb upstream 8356 true Bd2: 51733188-51741543 Brachypodium distachyon
Bradi2g52650 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51733188-51738187 Brachypodium distachyon
Bradi2g52650 5.0kb downstream 5.0kb downstream 8356 true Bd2: 51738188-51746543 Brachypodium distachyon
Bradi2g52650 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51741544-51746543 Brachypodium distachyon
Bradi2g52650 10.0kb upstream 10.0kb upstream 13356 true Bd2: 51728188-51741543 Brachypodium distachyon
Bradi2g52650 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51728188-51738187 Brachypodium distachyon
Bradi2g52650 10.0kb downstream 10.0kb downstream 13356 true Bd2: 51738188-51751543 Brachypodium distachyon
Bradi2g52650 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51741544-51751543 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026428 5273 Angiosperm View MSA
124582078 5269 Grass View MSA
121296323 5274 Embryophyte View MSA
123334505 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.063        
cufflinks 4.83        
cufflinks 5.121        
cufflinks 5.224        
cufflinks 3.246       Low
cufflinks 4.57        
cufflinks 4.203        
cufflinks 4.601        
cufflinks 4.468        
cufflinks 3.062       Low
cufflinks 3.629        
cufflinks 4.286        
cufflinks 3.411        
cufflinks 3.32        
cufflinks 4.253        
cufflinks 4.518        
cufflinks 4.461        
cufflinks 7.856       High
cufflinks 5.281        
cufflinks 3.132       Low
cufflinks 5.246        
cufflinks 4.218        
cufflinks 4.45        
cufflinks 4.06        
cufflinks 4.563        
cufflinks 4.567        
cufflinks 4.748        
cufflinks 4.686        
cufflinks 4.106        
cufflinks 5.847       High

0 Strain