Gene : Bradi4g19960 B. distachyon v3.1
Defline:  (1 of 1) K09658 - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2) Genomic Order:  2549
Name:  ? Bradi4g19960 Secondary Identifier:  ? PAC:32791383
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g19960 0.5kb upstream 0.5kb upstream 3073 true Bd4: 22880582-22883654 Brachypodium distachyon
Bradi4g19960 0.5kb upstream 0.5kb upstream 500 false Bd4: 22880582-22881081 Brachypodium distachyon
Bradi4g19960 0.5kb downstream 0.5kb downstream 3073 true Bd4: 22881082-22884154 Brachypodium distachyon
Bradi4g19960 0.5kb downstream 0.5kb downstream 500 false Bd4: 22883655-22884154 Brachypodium distachyon
Bradi4g19960 1.0kb upstream 1.0kb upstream 3573 true Bd4: 22880082-22883654 Brachypodium distachyon
Bradi4g19960 1.0kb upstream 1.0kb upstream 1000 false Bd4: 22880082-22881081 Brachypodium distachyon
Bradi4g19960 1.0kb downstream 1.0kb downstream 3573 true Bd4: 22881082-22884654 Brachypodium distachyon
Bradi4g19960 1.0kb downstream 1.0kb downstream 1000 false Bd4: 22883655-22884654 Brachypodium distachyon
Bradi4g19960 2.0kb upstream 2.0kb upstream 4573 true Bd4: 22879082-22883654 Brachypodium distachyon
Bradi4g19960 2.0kb upstream 2.0kb upstream 2000 false Bd4: 22879082-22881081 Brachypodium distachyon
Bradi4g19960 2.0kb downstream 2.0kb downstream 4573 true Bd4: 22881082-22885654 Brachypodium distachyon
Bradi4g19960 2.0kb downstream 2.0kb downstream 2000 false Bd4: 22883655-22885654 Brachypodium distachyon
Bradi4g19960 5.0kb upstream 5.0kb upstream 7573 true Bd4: 22876082-22883654 Brachypodium distachyon
Bradi4g19960 5.0kb upstream 5.0kb upstream 5000 false Bd4: 22876082-22881081 Brachypodium distachyon
Bradi4g19960 5.0kb downstream 5.0kb downstream 7573 true Bd4: 22881082-22888654 Brachypodium distachyon
Bradi4g19960 5.0kb downstream 5.0kb downstream 5000 false Bd4: 22883655-22888654 Brachypodium distachyon
Bradi4g19960 10.0kb upstream 10.0kb upstream 12573 true Bd4: 22871082-22883654 Brachypodium distachyon
Bradi4g19960 10.0kb upstream 10.0kb upstream 10000 false Bd4: 22871082-22881081 Brachypodium distachyon
Bradi4g19960 10.0kb downstream 10.0kb downstream 12573 true Bd4: 22881082-22893654 Brachypodium distachyon
Bradi4g19960 10.0kb downstream 10.0kb downstream 10000 false Bd4: 22883655-22893654 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570008 5269 Grass View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.271        
cufflinks 1.326        
cufflinks 1.522        
cufflinks 1.398        
cufflinks 1.214        
cufflinks 1.072        
cufflinks 1.28        
cufflinks 1.285        
cufflinks 1.118        
cufflinks 2.609       High
cufflinks 0.99       Low
cufflinks 0.89       Low
cufflinks 0.857       Low
cufflinks 0.959       Low
cufflinks 0.923       Low
cufflinks 1.166        
cufflinks 1.791        
cufflinks 2.148       High
cufflinks 1.664        
cufflinks 1.587        
cufflinks 2.335       High
cufflinks 1.456        
cufflinks 1.245        
cufflinks 1.218        
cufflinks 1.329        
cufflinks 2.43       High
cufflinks 1.331        
cufflinks 2.07       High
cufflinks 1.443        
cufflinks 1.791        

0 Strain