Gene : Bradi2g52800 B. distachyon v3.1
Defline:  (1 of 2) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED Genomic Order:  6347
Name:  ? Bradi2g52800 Secondary Identifier:  ? PAC:32773726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52800 0.5kb upstream 0.5kb upstream 4203 true Bd2: 51836884-51841086 Brachypodium distachyon
Bradi2g52800 0.5kb upstream 0.5kb upstream 500 false Bd2: 51840587-51841086 Brachypodium distachyon
Bradi2g52800 0.5kb downstream 0.5kb downstream 4203 true Bd2: 51836384-51840586 Brachypodium distachyon
Bradi2g52800 0.5kb downstream 0.5kb downstream 500 false Bd2: 51836384-51836883 Brachypodium distachyon
Bradi2g52800 1.0kb upstream 1.0kb upstream 4703 true Bd2: 51836884-51841586 Brachypodium distachyon
Bradi2g52800 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51840587-51841586 Brachypodium distachyon
Bradi2g52800 1.0kb downstream 1.0kb downstream 4703 true Bd2: 51835884-51840586 Brachypodium distachyon
Bradi2g52800 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51835884-51836883 Brachypodium distachyon
Bradi2g52800 2.0kb upstream 2.0kb upstream 5703 true Bd2: 51836884-51842586 Brachypodium distachyon
Bradi2g52800 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51840587-51842586 Brachypodium distachyon
Bradi2g52800 2.0kb downstream 2.0kb downstream 5703 true Bd2: 51834884-51840586 Brachypodium distachyon
Bradi2g52800 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51834884-51836883 Brachypodium distachyon
Bradi2g52800 5.0kb upstream 5.0kb upstream 8703 true Bd2: 51836884-51845586 Brachypodium distachyon
Bradi2g52800 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51840587-51845586 Brachypodium distachyon
Bradi2g52800 5.0kb downstream 5.0kb downstream 8703 true Bd2: 51831884-51840586 Brachypodium distachyon
Bradi2g52800 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51831884-51836883 Brachypodium distachyon
Bradi2g52800 10.0kb upstream 10.0kb upstream 13703 true Bd2: 51836884-51850586 Brachypodium distachyon
Bradi2g52800 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51840587-51850586 Brachypodium distachyon
Bradi2g52800 10.0kb downstream 10.0kb downstream 13703 true Bd2: 51826884-51840586 Brachypodium distachyon
Bradi2g52800 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51826884-51836883 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568976 5269 Grass View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.875        
cufflinks 1.329        
cufflinks 0.834        
cufflinks 1.286        
cufflinks 1.281        
cufflinks 1.215        
cufflinks 1.408        
cufflinks 1.546        
cufflinks 1.416        
cufflinks 1.038        
cufflinks 1.352        
cufflinks 1.313        
cufflinks 1.208        
cufflinks 1.324        
cufflinks 0.894        
cufflinks 1.312        
cufflinks 1.196        
cufflinks 0.942        
cufflinks 2.433       High
cufflinks 0.325       Low
cufflinks 0.801        
cufflinks 1.327        
cufflinks 1.834       High
cufflinks 1.533        
cufflinks 1.263        
cufflinks 1.062        
cufflinks 0.928        
cufflinks 0.912        
cufflinks 1.004        
cufflinks 1.082        

0 Strain