Gene : Bradi4g19990 B. distachyon v3.1
Defline:  (1 of 1) PTHR18934:SF131 - RNA HELICASE, PUTATIVE-RELATED Genomic Order:  2552
Name:  ? Bradi4g19990 Secondary Identifier:  ? PAC:32785669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g19990 0.5kb upstream 0.5kb upstream 12033 true Bd4: 22902424-22914456 Brachypodium distachyon
Bradi4g19990 0.5kb upstream 0.5kb upstream 500 false Bd4: 22913957-22914456 Brachypodium distachyon
Bradi4g19990 0.5kb downstream 0.5kb downstream 12033 true Bd4: 22901924-22913956 Brachypodium distachyon
Bradi4g19990 0.5kb downstream 0.5kb downstream 500 false Bd4: 22901924-22902423 Brachypodium distachyon
Bradi4g19990 1.0kb upstream 1.0kb upstream 12533 true Bd4: 22902424-22914956 Brachypodium distachyon
Bradi4g19990 1.0kb upstream 1.0kb upstream 1000 false Bd4: 22913957-22914956 Brachypodium distachyon
Bradi4g19990 1.0kb downstream 1.0kb downstream 12533 true Bd4: 22901424-22913956 Brachypodium distachyon
Bradi4g19990 1.0kb downstream 1.0kb downstream 1000 false Bd4: 22901424-22902423 Brachypodium distachyon
Bradi4g19990 2.0kb upstream 2.0kb upstream 13533 true Bd4: 22902424-22915956 Brachypodium distachyon
Bradi4g19990 2.0kb upstream 2.0kb upstream 2000 false Bd4: 22913957-22915956 Brachypodium distachyon
Bradi4g19990 2.0kb downstream 2.0kb downstream 13533 true Bd4: 22900424-22913956 Brachypodium distachyon
Bradi4g19990 2.0kb downstream 2.0kb downstream 2000 false Bd4: 22900424-22902423 Brachypodium distachyon
Bradi4g19990 5.0kb upstream 5.0kb upstream 16533 true Bd4: 22902424-22918956 Brachypodium distachyon
Bradi4g19990 5.0kb upstream 5.0kb upstream 5000 false Bd4: 22913957-22918956 Brachypodium distachyon
Bradi4g19990 5.0kb downstream 5.0kb downstream 16533 true Bd4: 22897424-22913956 Brachypodium distachyon
Bradi4g19990 5.0kb downstream 5.0kb downstream 5000 false Bd4: 22897424-22902423 Brachypodium distachyon
Bradi4g19990 10.0kb upstream 10.0kb upstream 21533 true Bd4: 22902424-22923956 Brachypodium distachyon
Bradi4g19990 10.0kb upstream 10.0kb upstream 10000 false Bd4: 22913957-22923956 Brachypodium distachyon
Bradi4g19990 10.0kb downstream 10.0kb downstream 21533 true Bd4: 22892424-22913956 Brachypodium distachyon
Bradi4g19990 10.0kb downstream 10.0kb downstream 10000 false Bd4: 22892424-22902423 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575565 5269 Grass View MSA
122045278 5273 Angiosperm View MSA
121347414 5274 Embryophyte View MSA
123424380 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.923        
cufflinks 1.434        
cufflinks 1.414        
cufflinks 1.149        
cufflinks 0.558       Low
cufflinks 1.383        
cufflinks 1.259        
cufflinks 1.056        
cufflinks 1.285        
cufflinks 1.015        
cufflinks 1.352        
cufflinks 1.056        
cufflinks 1.069        
cufflinks 1.021        
cufflinks 0.822        
cufflinks 1.264        
cufflinks 0.819        
cufflinks 1.419        
cufflinks 1.11        
cufflinks 0.419       Low
cufflinks 0.971        
cufflinks 1.388        
cufflinks 1.043        
cufflinks 1.175        
cufflinks 1.145        
cufflinks 1.274        
cufflinks 1.421        
cufflinks 1.297        
cufflinks 1.304        
cufflinks 1.24        

0 Strain