Gene : Bradi2g52760 B. distachyon v3.1
Defline:  (1 of 2) PTHR10177//PTHR10177:SF241 - CYCLINE // SUBFAMILY NOT NAMED Genomic Order:  6343
Name:  ? Bradi2g52760 Secondary Identifier:  ? PAC:32772708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52760 0.5kb upstream 0.5kb upstream 3459 true Bd2: 51811621-51815079 Brachypodium distachyon
Bradi2g52760 0.5kb upstream 0.5kb upstream 500 false Bd2: 51814580-51815079 Brachypodium distachyon
Bradi2g52760 0.5kb downstream 0.5kb downstream 3459 true Bd2: 51811121-51814579 Brachypodium distachyon
Bradi2g52760 0.5kb downstream 0.5kb downstream 500 false Bd2: 51811121-51811620 Brachypodium distachyon
Bradi2g52760 1.0kb upstream 1.0kb upstream 3959 true Bd2: 51811621-51815579 Brachypodium distachyon
Bradi2g52760 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51814580-51815579 Brachypodium distachyon
Bradi2g52760 1.0kb downstream 1.0kb downstream 3959 true Bd2: 51810621-51814579 Brachypodium distachyon
Bradi2g52760 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51810621-51811620 Brachypodium distachyon
Bradi2g52760 2.0kb upstream 2.0kb upstream 4959 true Bd2: 51811621-51816579 Brachypodium distachyon
Bradi2g52760 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51814580-51816579 Brachypodium distachyon
Bradi2g52760 2.0kb downstream 2.0kb downstream 4959 true Bd2: 51809621-51814579 Brachypodium distachyon
Bradi2g52760 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51809621-51811620 Brachypodium distachyon
Bradi2g52760 5.0kb upstream 5.0kb upstream 7959 true Bd2: 51811621-51819579 Brachypodium distachyon
Bradi2g52760 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51814580-51819579 Brachypodium distachyon
Bradi2g52760 5.0kb downstream 5.0kb downstream 7959 true Bd2: 51806621-51814579 Brachypodium distachyon
Bradi2g52760 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51806621-51811620 Brachypodium distachyon
Bradi2g52760 10.0kb upstream 10.0kb upstream 12959 true Bd2: 51811621-51824579 Brachypodium distachyon
Bradi2g52760 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51814580-51824579 Brachypodium distachyon
Bradi2g52760 10.0kb downstream 10.0kb downstream 12959 true Bd2: 51801621-51814579 Brachypodium distachyon
Bradi2g52760 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51801621-51811620 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582720 5269 Grass View MSA
122046684 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349995 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.283     High  
cufflinks 20.021     High  
cufflinks 20.8     High  
cufflinks 20.261     High  
cufflinks 10.867     High  
cufflinks 16.055     High  
cufflinks 16.525     High  
cufflinks 14.089     High  
cufflinks 11.992     High  
cufflinks 12.25     High  
cufflinks 0.006     Low Low
cufflinks 12.387     High  
cufflinks 0.055     Low Low
cufflinks 0.006     Low Low
cufflinks 4.464        
cufflinks 17.662     High  
cufflinks 13.084     High  
cufflinks 33.419     High  
cufflinks 13.345     High  
cufflinks 1.692        
cufflinks 10.859        
cufflinks 17.286     High  
cufflinks 11.782     High  
cufflinks 10.634     High  
cufflinks 15.146     High  
cufflinks 23.018     High  
cufflinks 0.017     Low Low
cufflinks 18.192     High  
cufflinks 16.339     High  
cufflinks 18.919     High  

0 Strain