Gene : Bradi2g52720 B. distachyon v3.1
Defline:  (1 of 1) PF11460 - Protein of unknown function (DUF3007) (DUF3007) Genomic Order:  6339
Name:  ? Bradi2g52720 Secondary Identifier:  ? PAC:32773428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52720 0.5kb upstream 0.5kb upstream 1843 true Bd2: 51800541-51802383 Brachypodium distachyon
Bradi2g52720 0.5kb upstream 0.5kb upstream 500 false Bd2: 51801884-51802383 Brachypodium distachyon
Bradi2g52720 0.5kb downstream 0.5kb downstream 1843 true Bd2: 51800041-51801883 Brachypodium distachyon
Bradi2g52720 0.5kb downstream 0.5kb downstream 500 false Bd2: 51800041-51800540 Brachypodium distachyon
Bradi2g52720 1.0kb upstream 1.0kb upstream 2343 true Bd2: 51800541-51802883 Brachypodium distachyon
Bradi2g52720 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51801884-51802883 Brachypodium distachyon
Bradi2g52720 1.0kb downstream 1.0kb downstream 2343 true Bd2: 51799541-51801883 Brachypodium distachyon
Bradi2g52720 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51799541-51800540 Brachypodium distachyon
Bradi2g52720 2.0kb upstream 2.0kb upstream 3343 true Bd2: 51800541-51803883 Brachypodium distachyon
Bradi2g52720 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51801884-51803883 Brachypodium distachyon
Bradi2g52720 2.0kb downstream 2.0kb downstream 3343 true Bd2: 51798541-51801883 Brachypodium distachyon
Bradi2g52720 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51798541-51800540 Brachypodium distachyon
Bradi2g52720 5.0kb upstream 5.0kb upstream 6343 true Bd2: 51800541-51806883 Brachypodium distachyon
Bradi2g52720 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51801884-51806883 Brachypodium distachyon
Bradi2g52720 5.0kb downstream 5.0kb downstream 6343 true Bd2: 51795541-51801883 Brachypodium distachyon
Bradi2g52720 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51795541-51800540 Brachypodium distachyon
Bradi2g52720 10.0kb upstream 10.0kb upstream 11343 true Bd2: 51800541-51811883 Brachypodium distachyon
Bradi2g52720 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51801884-51811883 Brachypodium distachyon
Bradi2g52720 10.0kb downstream 10.0kb downstream 11343 true Bd2: 51790541-51801883 Brachypodium distachyon
Bradi2g52720 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51790541-51800540 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579487 5269 Grass View MSA
122047779 5273 Angiosperm View MSA
121344502 5274 Embryophyte View MSA
123428254 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 115.125     High  
cufflinks 134.161     High  
cufflinks 134.515     High  
cufflinks 211.977     High  
cufflinks 100.448     High  
cufflinks 114.21     High  
cufflinks 132.315     High  
cufflinks 115.815     High  
cufflinks 119.131     High  
cufflinks 146.968     High  
cufflinks 167.862     High  
cufflinks 95.785     High  
cufflinks 141.792     High  
cufflinks 211.855     High  
cufflinks 188.169     High  
cufflinks 82.039     High  
cufflinks 172.646     High  
cufflinks 1.897       Low
cufflinks 182.376     High  
cufflinks 102.824     High  
cufflinks 105.586     High  
cufflinks 86.624     High  
cufflinks 130.785     High  
cufflinks 124.972     High  
cufflinks 147.111     High  
cufflinks 162.541     High  
cufflinks 231.786     High  
cufflinks 193.836     High  
cufflinks 146.201     High  
cufflinks 65.315     High  

0 Strain