Gene : Bradi2g52900 B. distachyon v3.1
Defline:  (1 of 1) 1.1.99.2 - L-2-hydroxyglutarate dehydrogenase / L-alpha-hydroxyglutarate dehydrogenase Genomic Order:  6362
Name:  ? Bradi2g52900 Secondary Identifier:  ? PAC:32781504
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52900 0.5kb upstream 0.5kb upstream 4445 true Bd2: 51946168-51950612 Brachypodium distachyon
Bradi2g52900 0.5kb upstream 0.5kb upstream 500 false Bd2: 51946168-51946667 Brachypodium distachyon
Bradi2g52900 0.5kb downstream 0.5kb downstream 4445 true Bd2: 51946668-51951112 Brachypodium distachyon
Bradi2g52900 0.5kb downstream 0.5kb downstream 500 false Bd2: 51950613-51951112 Brachypodium distachyon
Bradi2g52900 1.0kb upstream 1.0kb upstream 4945 true Bd2: 51945668-51950612 Brachypodium distachyon
Bradi2g52900 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51945668-51946667 Brachypodium distachyon
Bradi2g52900 1.0kb downstream 1.0kb downstream 4945 true Bd2: 51946668-51951612 Brachypodium distachyon
Bradi2g52900 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51950613-51951612 Brachypodium distachyon
Bradi2g52900 2.0kb upstream 2.0kb upstream 5945 true Bd2: 51944668-51950612 Brachypodium distachyon
Bradi2g52900 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51944668-51946667 Brachypodium distachyon
Bradi2g52900 2.0kb downstream 2.0kb downstream 5945 true Bd2: 51946668-51952612 Brachypodium distachyon
Bradi2g52900 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51950613-51952612 Brachypodium distachyon
Bradi2g52900 5.0kb upstream 5.0kb upstream 8945 true Bd2: 51941668-51950612 Brachypodium distachyon
Bradi2g52900 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51941668-51946667 Brachypodium distachyon
Bradi2g52900 5.0kb downstream 5.0kb downstream 8945 true Bd2: 51946668-51955612 Brachypodium distachyon
Bradi2g52900 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51950613-51955612 Brachypodium distachyon
Bradi2g52900 10.0kb upstream 10.0kb upstream 13945 true Bd2: 51936668-51950612 Brachypodium distachyon
Bradi2g52900 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51936668-51946667 Brachypodium distachyon
Bradi2g52900 10.0kb downstream 10.0kb downstream 13945 true Bd2: 51946668-51960612 Brachypodium distachyon
Bradi2g52900 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51950613-51960612 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570704 5269 Grass View MSA
122042852 5273 Angiosperm View MSA
121347258 5274 Embryophyte View MSA
123427019 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.559       Low
cufflinks 1.379        
cufflinks 1.654       High
cufflinks 1.519        
cufflinks 0.62       Low
cufflinks 1.182        
cufflinks 1.192        
cufflinks 0.978        
cufflinks 1.04        
cufflinks 1.396        
cufflinks 0.97        
cufflinks 1.026        
cufflinks 0.781        
cufflinks 0.798        
cufflinks 0.545       Low
cufflinks 1.139        
cufflinks 1.036        
cufflinks 1.063        
cufflinks 1.173        
cufflinks 0.558       Low
cufflinks 1.203        
cufflinks 1.418        
cufflinks 0.932        
cufflinks 1.067        
cufflinks 1.223        
cufflinks 1.919       High
cufflinks 0.846        
cufflinks 1.672       High
cufflinks 1.467        
cufflinks 1.321        

0 Strain