Gene : Bradi2g52910 B. distachyon v3.1
Defline:  (1 of 1) KOG3237 - Uncharacterized conserved protein Genomic Order:  6363
Name:  ? Bradi2g52910 Secondary Identifier:  ? PAC:32775196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52910 0.5kb upstream 0.5kb upstream 3407 true Bd2: 51951171-51954577 Brachypodium distachyon
Bradi2g52910 0.5kb upstream 0.5kb upstream 500 false Bd2: 51954078-51954577 Brachypodium distachyon
Bradi2g52910 0.5kb downstream 0.5kb downstream 3407 true Bd2: 51950671-51954077 Brachypodium distachyon
Bradi2g52910 0.5kb downstream 0.5kb downstream 500 false Bd2: 51950671-51951170 Brachypodium distachyon
Bradi2g52910 1.0kb upstream 1.0kb upstream 3907 true Bd2: 51951171-51955077 Brachypodium distachyon
Bradi2g52910 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51954078-51955077 Brachypodium distachyon
Bradi2g52910 1.0kb downstream 1.0kb downstream 3907 true Bd2: 51950171-51954077 Brachypodium distachyon
Bradi2g52910 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51950171-51951170 Brachypodium distachyon
Bradi2g52910 2.0kb upstream 2.0kb upstream 4907 true Bd2: 51951171-51956077 Brachypodium distachyon
Bradi2g52910 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51954078-51956077 Brachypodium distachyon
Bradi2g52910 2.0kb downstream 2.0kb downstream 4907 true Bd2: 51949171-51954077 Brachypodium distachyon
Bradi2g52910 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51949171-51951170 Brachypodium distachyon
Bradi2g52910 5.0kb upstream 5.0kb upstream 7907 true Bd2: 51951171-51959077 Brachypodium distachyon
Bradi2g52910 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51954078-51959077 Brachypodium distachyon
Bradi2g52910 5.0kb downstream 5.0kb downstream 7907 true Bd2: 51946171-51954077 Brachypodium distachyon
Bradi2g52910 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51946171-51951170 Brachypodium distachyon
Bradi2g52910 10.0kb upstream 10.0kb upstream 12907 true Bd2: 51951171-51964077 Brachypodium distachyon
Bradi2g52910 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51954078-51964077 Brachypodium distachyon
Bradi2g52910 10.0kb downstream 10.0kb downstream 12907 true Bd2: 51941171-51954077 Brachypodium distachyon
Bradi2g52910 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51941171-51951170 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026243 5273 Angiosperm View MSA
124578921 5269 Grass View MSA
121350042 5274 Embryophyte View MSA
123425029 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.661        
cufflinks 7.53        
cufflinks 5.597        
cufflinks 7.438        
cufflinks 3.238       Low
cufflinks 5.786        
cufflinks 6.59        
cufflinks 5.048        
cufflinks 5.28        
cufflinks 3.43        
cufflinks 4.426        
cufflinks 4.332        
cufflinks 2.508       Low
cufflinks 3.389        
cufflinks 3.565        
cufflinks 6.216        
cufflinks 5.863        
cufflinks 11.442       High
cufflinks 6.001        
cufflinks 1.511       Low
cufflinks 6.059        
cufflinks 4.102        
cufflinks 4.578        
cufflinks 5.065        
cufflinks 7.159        
cufflinks 4.879        
cufflinks 3.388        
cufflinks 4.222        
cufflinks 3.48        
cufflinks 6.128        

0 Strain