Gene : Bradi2g53010 B. distachyon v3.1
Defline:  (1 of 2) PTHR10641:SF475 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  6375
Name:  ? Bradi2g53010 Secondary Identifier:  ? PAC:32779999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g53010 0.5kb upstream 0.5kb upstream 4573 true Bd2: 52023282-52027854 Brachypodium distachyon
Bradi2g53010 0.5kb upstream 0.5kb upstream 500 false Bd2: 52023282-52023781 Brachypodium distachyon
Bradi2g53010 0.5kb downstream 0.5kb downstream 4573 true Bd2: 52023782-52028354 Brachypodium distachyon
Bradi2g53010 0.5kb downstream 0.5kb downstream 500 false Bd2: 52027855-52028354 Brachypodium distachyon
Bradi2g53010 1.0kb upstream 1.0kb upstream 5073 true Bd2: 52022782-52027854 Brachypodium distachyon
Bradi2g53010 1.0kb upstream 1.0kb upstream 1000 false Bd2: 52022782-52023781 Brachypodium distachyon
Bradi2g53010 1.0kb downstream 1.0kb downstream 5073 true Bd2: 52023782-52028854 Brachypodium distachyon
Bradi2g53010 1.0kb downstream 1.0kb downstream 1000 false Bd2: 52027855-52028854 Brachypodium distachyon
Bradi2g53010 2.0kb upstream 2.0kb upstream 6073 true Bd2: 52021782-52027854 Brachypodium distachyon
Bradi2g53010 2.0kb upstream 2.0kb upstream 2000 false Bd2: 52021782-52023781 Brachypodium distachyon
Bradi2g53010 2.0kb downstream 2.0kb downstream 6073 true Bd2: 52023782-52029854 Brachypodium distachyon
Bradi2g53010 2.0kb downstream 2.0kb downstream 2000 false Bd2: 52027855-52029854 Brachypodium distachyon
Bradi2g53010 5.0kb upstream 5.0kb upstream 9073 true Bd2: 52018782-52027854 Brachypodium distachyon
Bradi2g53010 5.0kb upstream 5.0kb upstream 5000 false Bd2: 52018782-52023781 Brachypodium distachyon
Bradi2g53010 5.0kb downstream 5.0kb downstream 9073 true Bd2: 52023782-52032854 Brachypodium distachyon
Bradi2g53010 5.0kb downstream 5.0kb downstream 5000 false Bd2: 52027855-52032854 Brachypodium distachyon
Bradi2g53010 10.0kb upstream 10.0kb upstream 14073 true Bd2: 52013782-52027854 Brachypodium distachyon
Bradi2g53010 10.0kb upstream 10.0kb upstream 10000 false Bd2: 52013782-52023781 Brachypodium distachyon
Bradi2g53010 10.0kb downstream 10.0kb downstream 14073 true Bd2: 52023782-52037854 Brachypodium distachyon
Bradi2g53010 10.0kb downstream 10.0kb downstream 10000 false Bd2: 52027855-52037854 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574474 5269 Grass View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.748        
cufflinks 2.161        
cufflinks 2.344        
cufflinks 1.954        
cufflinks 2.097        
cufflinks 2.426        
cufflinks 2.083        
cufflinks 2.649        
cufflinks 2.495        
cufflinks 2.408        
cufflinks 3.054        
cufflinks 2.123        
cufflinks 2.14        
cufflinks 2.324        
cufflinks 3.242        
cufflinks 2.09        
cufflinks 2.123        
cufflinks 3.196        
cufflinks 2.823        
cufflinks 2.789        
cufflinks 1.509       Low
cufflinks 2.374        
cufflinks 2.105        
cufflinks 2.281        
cufflinks 2.024        
cufflinks 2.572        
cufflinks 3.748       High
cufflinks 2.429        
cufflinks 2.303        
cufflinks 2.195        

0 Strain