Gene : Bradi2g53780 B. distachyon v3.1
Defline:  (1 of 2) PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Genomic Order:  6469
Name:  ? Bradi2g53780 Secondary Identifier:  ? PAC:32775803
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g53780 0.5kb upstream 0.5kb upstream 6731 true Bd2: 52652246-52658976 Brachypodium distachyon
Bradi2g53780 0.5kb upstream 0.5kb upstream 500 false Bd2: 52658477-52658976 Brachypodium distachyon
Bradi2g53780 0.5kb downstream 0.5kb downstream 6731 true Bd2: 52651746-52658476 Brachypodium distachyon
Bradi2g53780 0.5kb downstream 0.5kb downstream 500 false Bd2: 52651746-52652245 Brachypodium distachyon
Bradi2g53780 1.0kb upstream 1.0kb upstream 7231 true Bd2: 52652246-52659476 Brachypodium distachyon
Bradi2g53780 1.0kb upstream 1.0kb upstream 1000 false Bd2: 52658477-52659476 Brachypodium distachyon
Bradi2g53780 1.0kb downstream 1.0kb downstream 7231 true Bd2: 52651246-52658476 Brachypodium distachyon
Bradi2g53780 1.0kb downstream 1.0kb downstream 1000 false Bd2: 52651246-52652245 Brachypodium distachyon
Bradi2g53780 2.0kb upstream 2.0kb upstream 8231 true Bd2: 52652246-52660476 Brachypodium distachyon
Bradi2g53780 2.0kb upstream 2.0kb upstream 2000 false Bd2: 52658477-52660476 Brachypodium distachyon
Bradi2g53780 2.0kb downstream 2.0kb downstream 8231 true Bd2: 52650246-52658476 Brachypodium distachyon
Bradi2g53780 2.0kb downstream 2.0kb downstream 2000 false Bd2: 52650246-52652245 Brachypodium distachyon
Bradi2g53780 5.0kb upstream 5.0kb upstream 11231 true Bd2: 52652246-52663476 Brachypodium distachyon
Bradi2g53780 5.0kb upstream 5.0kb upstream 5000 false Bd2: 52658477-52663476 Brachypodium distachyon
Bradi2g53780 5.0kb downstream 5.0kb downstream 11231 true Bd2: 52647246-52658476 Brachypodium distachyon
Bradi2g53780 5.0kb downstream 5.0kb downstream 5000 false Bd2: 52647246-52652245 Brachypodium distachyon
Bradi2g53780 10.0kb upstream 10.0kb upstream 16231 true Bd2: 52652246-52668476 Brachypodium distachyon
Bradi2g53780 10.0kb upstream 10.0kb upstream 10000 false Bd2: 52658477-52668476 Brachypodium distachyon
Bradi2g53780 10.0kb downstream 10.0kb downstream 16231 true Bd2: 52642246-52658476 Brachypodium distachyon
Bradi2g53780 10.0kb downstream 10.0kb downstream 10000 false Bd2: 52642246-52652245 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583091 5269 Grass View MSA
122041668 5273 Angiosperm View MSA
121345431 5274 Embryophyte View MSA
123380215 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.576     High High
cufflinks 18.02     High  
cufflinks 12.501     High  
cufflinks 16.541     High  
cufflinks 8.766        
cufflinks 24.295     High  
cufflinks 18.535     High  
cufflinks 33.348     High  
cufflinks 27.328     High  
cufflinks 14.562     High  
cufflinks 24.144     High  
cufflinks 31.275     High  
cufflinks 28.61     High  
cufflinks 31.564     High  
cufflinks 49.094     High High
cufflinks 26.195     High  
cufflinks 20.024     High  
cufflinks 2.589       Low
cufflinks 9.735        
cufflinks 7.537       Low
cufflinks 5.37       Low
cufflinks 20.999     High  
cufflinks 36.415     High High
cufflinks 29.735     High  
cufflinks 23.026     High  
cufflinks 12.806     High  
cufflinks 26.046     High  
cufflinks 15.094     High  
cufflinks 19.434     High  
cufflinks 9.066        

0 Strain