Gene : Bradi4g20110 B. distachyon v3.1
Defline:  (1 of 3) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  2564
Name:  ? Bradi4g20110 Secondary Identifier:  ? PAC:32784798
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6368 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g20110 0.5kb upstream 0.5kb upstream 15133 true Bd4: 23061225-23076357 Brachypodium distachyon
Bradi4g20110 0.5kb upstream 0.5kb upstream 500 false Bd4: 23061225-23061724 Brachypodium distachyon
Bradi4g20110 0.5kb downstream 0.5kb downstream 15133 true Bd4: 23061725-23076857 Brachypodium distachyon
Bradi4g20110 0.5kb downstream 0.5kb downstream 500 false Bd4: 23076358-23076857 Brachypodium distachyon
Bradi4g20110 1.0kb upstream 1.0kb upstream 15633 true Bd4: 23060725-23076357 Brachypodium distachyon
Bradi4g20110 1.0kb upstream 1.0kb upstream 1000 false Bd4: 23060725-23061724 Brachypodium distachyon
Bradi4g20110 1.0kb downstream 1.0kb downstream 15633 true Bd4: 23061725-23077357 Brachypodium distachyon
Bradi4g20110 1.0kb downstream 1.0kb downstream 1000 false Bd4: 23076358-23077357 Brachypodium distachyon
Bradi4g20110 2.0kb upstream 2.0kb upstream 16633 true Bd4: 23059725-23076357 Brachypodium distachyon
Bradi4g20110 2.0kb upstream 2.0kb upstream 2000 false Bd4: 23059725-23061724 Brachypodium distachyon
Bradi4g20110 2.0kb downstream 2.0kb downstream 16633 true Bd4: 23061725-23078357 Brachypodium distachyon
Bradi4g20110 2.0kb downstream 2.0kb downstream 2000 false Bd4: 23076358-23078357 Brachypodium distachyon
Bradi4g20110 5.0kb upstream 5.0kb upstream 19633 true Bd4: 23056725-23076357 Brachypodium distachyon
Bradi4g20110 5.0kb upstream 5.0kb upstream 5000 false Bd4: 23056725-23061724 Brachypodium distachyon
Bradi4g20110 5.0kb downstream 5.0kb downstream 19633 true Bd4: 23061725-23081357 Brachypodium distachyon
Bradi4g20110 5.0kb downstream 5.0kb downstream 5000 false Bd4: 23076358-23081357 Brachypodium distachyon
Bradi4g20110 10.0kb upstream 10.0kb upstream 24633 true Bd4: 23051725-23076357 Brachypodium distachyon
Bradi4g20110 10.0kb upstream 10.0kb upstream 10000 false Bd4: 23051725-23061724 Brachypodium distachyon
Bradi4g20110 10.0kb downstream 10.0kb downstream 24633 true Bd4: 23061725-23086357 Brachypodium distachyon
Bradi4g20110 10.0kb downstream 10.0kb downstream 10000 false Bd4: 23076358-23086357 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576680 5269 Grass View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low  
cufflinks 0.026     Low  
cufflinks 0.028     Low  
cufflinks 0.026     Low  
cufflinks 0.011     Low  
cufflinks 0.026     Low  
cufflinks 0.023     Low  
cufflinks 0.025     Low  
cufflinks 0.031     Low  
cufflinks 0.012     Low  
cufflinks 0.028     Low  
cufflinks 0.027     Low  
cufflinks 0.026     Low  
cufflinks 0.024     Low  
cufflinks 0.028     Low  
cufflinks 0.017     Low  
cufflinks 0.012     Low  
cufflinks 0.074     Low High
cufflinks 0.018     Low  
cufflinks 0.004     Low Low
cufflinks 0.028     Low  
cufflinks 0.017     Low  
cufflinks 0.031     Low  
cufflinks 0.028     Low  
cufflinks 0.029     Low  
cufflinks 0.024     Low  
cufflinks 0.025     Low  
cufflinks 0.019     Low  
cufflinks 0.025     Low  
cufflinks 0.024     Low  

0 Strain