Gene : Bradi2g54127 B. distachyon v3.1
Defline:  (1 of 16) 5.3.4.1 - Protein disulfide-isomerase / S-S rearrangase Genomic Order:  6509
Name:  ? Bradi2g54127 Secondary Identifier:  ? PAC:32778005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g54127 0.5kb upstream 0.5kb upstream 2400 true Bd2: 52866934-52869333 Brachypodium distachyon
Bradi2g54127 0.5kb upstream 0.5kb upstream 500 false Bd2: 52866934-52867433 Brachypodium distachyon
Bradi2g54127 0.5kb downstream 0.5kb downstream 2400 true Bd2: 52867434-52869833 Brachypodium distachyon
Bradi2g54127 0.5kb downstream 0.5kb downstream 500 false Bd2: 52869334-52869833 Brachypodium distachyon
Bradi2g54127 1.0kb upstream 1.0kb upstream 2900 true Bd2: 52866434-52869333 Brachypodium distachyon
Bradi2g54127 1.0kb upstream 1.0kb upstream 1000 false Bd2: 52866434-52867433 Brachypodium distachyon
Bradi2g54127 1.0kb downstream 1.0kb downstream 2900 true Bd2: 52867434-52870333 Brachypodium distachyon
Bradi2g54127 1.0kb downstream 1.0kb downstream 1000 false Bd2: 52869334-52870333 Brachypodium distachyon
Bradi2g54127 2.0kb upstream 2.0kb upstream 3900 true Bd2: 52865434-52869333 Brachypodium distachyon
Bradi2g54127 2.0kb upstream 2.0kb upstream 2000 false Bd2: 52865434-52867433 Brachypodium distachyon
Bradi2g54127 2.0kb downstream 2.0kb downstream 3900 true Bd2: 52867434-52871333 Brachypodium distachyon
Bradi2g54127 2.0kb downstream 2.0kb downstream 2000 false Bd2: 52869334-52871333 Brachypodium distachyon
Bradi2g54127 5.0kb upstream 5.0kb upstream 6900 true Bd2: 52862434-52869333 Brachypodium distachyon
Bradi2g54127 5.0kb upstream 5.0kb upstream 5000 false Bd2: 52862434-52867433 Brachypodium distachyon
Bradi2g54127 5.0kb downstream 5.0kb downstream 6900 true Bd2: 52867434-52874333 Brachypodium distachyon
Bradi2g54127 5.0kb downstream 5.0kb downstream 5000 false Bd2: 52869334-52874333 Brachypodium distachyon
Bradi2g54127 10.0kb upstream 10.0kb upstream 11900 true Bd2: 52857434-52869333 Brachypodium distachyon
Bradi2g54127 10.0kb upstream 10.0kb upstream 10000 false Bd2: 52857434-52867433 Brachypodium distachyon
Bradi2g54127 10.0kb downstream 10.0kb downstream 11900 true Bd2: 52867434-52879333 Brachypodium distachyon
Bradi2g54127 10.0kb downstream 10.0kb downstream 10000 false Bd2: 52869334-52879333 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579613 5269 Grass View MSA
122042691 5273 Angiosperm View MSA
121347077 5274 Embryophyte View MSA
123424014 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.178        
cufflinks 9.766        
cufflinks 12.959     High  
cufflinks 12.257     High  
cufflinks 5.762       Low
cufflinks 8.848        
cufflinks 10.855     High  
cufflinks 10.107     High  
cufflinks 9.445        
cufflinks 18.889     High High
cufflinks 10.536     High  
cufflinks 5.506       Low
cufflinks 9.975     High  
cufflinks 12.882     High  
cufflinks 7.533        
cufflinks 8.487        
cufflinks 13.662     High  
cufflinks 2.469       Low
cufflinks 12.591        
cufflinks 4.716       Low
cufflinks 11.138     High  
cufflinks 10.504     High  
cufflinks 9.523     High  
cufflinks 9.15        
cufflinks 11.424     High  
cufflinks 18.4     High High
cufflinks 12.561     High  
cufflinks 25.208     High High
cufflinks 21.548     High High
cufflinks 5.053       Low

0 Strain