Gene : Bradi2g49830 B. distachyon v3.1
Defline:  (1 of 3) PF06884 - Protein of unknown function (DUF1264) (DUF1264) Genomic Order:  5985
Name:  ? Bradi2g49830 Secondary Identifier:  ? PAC:32778869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g49830 0.5kb upstream 0.5kb upstream 2571 true Bd2: 49629023-49631593 Brachypodium distachyon
Bradi2g49830 0.5kb upstream 0.5kb upstream 500 false Bd2: 49629023-49629522 Brachypodium distachyon
Bradi2g49830 0.5kb downstream 0.5kb downstream 2571 true Bd2: 49629523-49632093 Brachypodium distachyon
Bradi2g49830 0.5kb downstream 0.5kb downstream 500 false Bd2: 49631594-49632093 Brachypodium distachyon
Bradi2g49830 1.0kb upstream 1.0kb upstream 3071 true Bd2: 49628523-49631593 Brachypodium distachyon
Bradi2g49830 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49628523-49629522 Brachypodium distachyon
Bradi2g49830 1.0kb downstream 1.0kb downstream 3071 true Bd2: 49629523-49632593 Brachypodium distachyon
Bradi2g49830 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49631594-49632593 Brachypodium distachyon
Bradi2g49830 2.0kb upstream 2.0kb upstream 4071 true Bd2: 49627523-49631593 Brachypodium distachyon
Bradi2g49830 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49627523-49629522 Brachypodium distachyon
Bradi2g49830 2.0kb downstream 2.0kb downstream 4071 true Bd2: 49629523-49633593 Brachypodium distachyon
Bradi2g49830 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49631594-49633593 Brachypodium distachyon
Bradi2g49830 5.0kb upstream 5.0kb upstream 7071 true Bd2: 49624523-49631593 Brachypodium distachyon
Bradi2g49830 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49624523-49629522 Brachypodium distachyon
Bradi2g49830 5.0kb downstream 5.0kb downstream 7071 true Bd2: 49629523-49636593 Brachypodium distachyon
Bradi2g49830 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49631594-49636593 Brachypodium distachyon
Bradi2g49830 10.0kb upstream 10.0kb upstream 12071 true Bd2: 49619523-49631593 Brachypodium distachyon
Bradi2g49830 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49619523-49629522 Brachypodium distachyon
Bradi2g49830 10.0kb downstream 10.0kb downstream 12071 true Bd2: 49629523-49641593 Brachypodium distachyon
Bradi2g49830 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49631594-49641593 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583471 5269 Grass View MSA
122044029 5273 Angiosperm View MSA
121350968 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.017     Low  
cufflinks 0.013     Low  
cufflinks 0.029     Low  
cufflinks 0.026     Low  
cufflinks 0.007     Low Low
cufflinks 0.033     Low  
cufflinks 0.016     Low  
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.009     Low Low
cufflinks 0.074     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.192     Low  
cufflinks 4.534       High
cufflinks 0.402       High
cufflinks 0.031     Low  
cufflinks 0.008     Low Low
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.05     Low  

0 Strain