Gene : Bradi2g50070 B. distachyon v3.1
Defline:  (1 of 1) PTHR33873:SF1 - TRANSCRIPTION FACTOR VOZ1 Genomic Order:  6014
Name:  ? Bradi2g50070 Secondary Identifier:  ? PAC:32777491
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g50070 0.5kb upstream 0.5kb upstream 5580 true Bd2: 49807122-49812701 Brachypodium distachyon
Bradi2g50070 0.5kb upstream 0.5kb upstream 500 false Bd2: 49812202-49812701 Brachypodium distachyon
Bradi2g50070 0.5kb downstream 0.5kb downstream 5580 true Bd2: 49806622-49812201 Brachypodium distachyon
Bradi2g50070 0.5kb downstream 0.5kb downstream 500 false Bd2: 49806622-49807121 Brachypodium distachyon
Bradi2g50070 1.0kb upstream 1.0kb upstream 6080 true Bd2: 49807122-49813201 Brachypodium distachyon
Bradi2g50070 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49812202-49813201 Brachypodium distachyon
Bradi2g50070 1.0kb downstream 1.0kb downstream 6080 true Bd2: 49806122-49812201 Brachypodium distachyon
Bradi2g50070 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49806122-49807121 Brachypodium distachyon
Bradi2g50070 2.0kb upstream 2.0kb upstream 7080 true Bd2: 49807122-49814201 Brachypodium distachyon
Bradi2g50070 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49812202-49814201 Brachypodium distachyon
Bradi2g50070 2.0kb downstream 2.0kb downstream 7080 true Bd2: 49805122-49812201 Brachypodium distachyon
Bradi2g50070 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49805122-49807121 Brachypodium distachyon
Bradi2g50070 5.0kb upstream 5.0kb upstream 10080 true Bd2: 49807122-49817201 Brachypodium distachyon
Bradi2g50070 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49812202-49817201 Brachypodium distachyon
Bradi2g50070 5.0kb downstream 5.0kb downstream 10080 true Bd2: 49802122-49812201 Brachypodium distachyon
Bradi2g50070 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49802122-49807121 Brachypodium distachyon
Bradi2g50070 10.0kb upstream 10.0kb upstream 15080 true Bd2: 49807122-49822201 Brachypodium distachyon
Bradi2g50070 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49812202-49822201 Brachypodium distachyon
Bradi2g50070 10.0kb downstream 10.0kb downstream 15080 true Bd2: 49797122-49812201 Brachypodium distachyon
Bradi2g50070 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49797122-49807121 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575606 5269 Grass View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.349        
cufflinks 8.218        
cufflinks 22.582     High High
cufflinks 8.904        
cufflinks 16.817     High  
cufflinks 4.162       Low
cufflinks 5.927       Low
cufflinks 5.088       Low
cufflinks 4.05       Low
cufflinks 21.777     High High
cufflinks 10.794     High  
cufflinks 5.832       Low
cufflinks 7.72     High  
cufflinks 7.501        
cufflinks 7.641        
cufflinks 6.29        
cufflinks 6.27        
cufflinks 14.478     High  
cufflinks 19.208     High High
cufflinks 32.145     High High
cufflinks 9.87        
cufflinks 17.674     High  
cufflinks 5.987       Low
cufflinks 4.198       Low
cufflinks 4.327       Low
cufflinks 25.492     High High
cufflinks 10.234     High  
cufflinks 27.657     High High
cufflinks 22.322     High High
cufflinks 8.844        

0 Strain