Gene : Bradi2g50030 B. distachyon v3.1
Defline:  (1 of 1) PTHR12630//PTHR12630:SF8 - N-LINKED OLIGOSACCHARIDE PROCESSING // SUBFAMILY NOT NAMED Genomic Order:  6007
Name:  ? Bradi2g50030 Secondary Identifier:  ? PAC:32774393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g50030 0.5kb upstream 0.5kb upstream 2069 true Bd2: 49771515-49773583 Brachypodium distachyon
Bradi2g50030 0.5kb upstream 0.5kb upstream 500 false Bd2: 49773084-49773583 Brachypodium distachyon
Bradi2g50030 0.5kb downstream 0.5kb downstream 2069 true Bd2: 49771015-49773083 Brachypodium distachyon
Bradi2g50030 0.5kb downstream 0.5kb downstream 500 false Bd2: 49771015-49771514 Brachypodium distachyon
Bradi2g50030 1.0kb upstream 1.0kb upstream 2569 true Bd2: 49771515-49774083 Brachypodium distachyon
Bradi2g50030 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49773084-49774083 Brachypodium distachyon
Bradi2g50030 1.0kb downstream 1.0kb downstream 2569 true Bd2: 49770515-49773083 Brachypodium distachyon
Bradi2g50030 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49770515-49771514 Brachypodium distachyon
Bradi2g50030 2.0kb upstream 2.0kb upstream 3569 true Bd2: 49771515-49775083 Brachypodium distachyon
Bradi2g50030 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49773084-49775083 Brachypodium distachyon
Bradi2g50030 2.0kb downstream 2.0kb downstream 3569 true Bd2: 49769515-49773083 Brachypodium distachyon
Bradi2g50030 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49769515-49771514 Brachypodium distachyon
Bradi2g50030 5.0kb upstream 5.0kb upstream 6569 true Bd2: 49771515-49778083 Brachypodium distachyon
Bradi2g50030 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49773084-49778083 Brachypodium distachyon
Bradi2g50030 5.0kb downstream 5.0kb downstream 6569 true Bd2: 49766515-49773083 Brachypodium distachyon
Bradi2g50030 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49766515-49771514 Brachypodium distachyon
Bradi2g50030 10.0kb upstream 10.0kb upstream 11569 true Bd2: 49771515-49783083 Brachypodium distachyon
Bradi2g50030 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49773084-49783083 Brachypodium distachyon
Bradi2g50030 10.0kb downstream 10.0kb downstream 11569 true Bd2: 49761515-49773083 Brachypodium distachyon
Bradi2g50030 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49761515-49771514 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569434 5269 Grass View MSA
122047076 5273 Angiosperm View MSA
121346791 5274 Embryophyte View MSA
123380446 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.668        
cufflinks 3.071        
cufflinks 2.894        
cufflinks 3.55        
cufflinks 2.684        
cufflinks 2.661        
cufflinks 2.752        
cufflinks 2.653        
cufflinks 2.895        
cufflinks 2.626        
cufflinks 2.865        
cufflinks 2.688        
cufflinks 1.723       Low
cufflinks 2.462        
cufflinks 3.578        
cufflinks 2.109        
cufflinks 3.118        
cufflinks 5.09       High
cufflinks 3.007        
cufflinks 1.22       Low
cufflinks 4.321       High
cufflinks 2.142        
cufflinks 2.816        
cufflinks 3.054        
cufflinks 2.794        
cufflinks 3.096        
cufflinks 3.345        
cufflinks 2.855        
cufflinks 2.552        
cufflinks 5.147       High

0 Strain