Gene : Bradi2g50237 B. distachyon v3.1
Defline:  (1 of 1) PTHR22792:SF58 - LA-RELATED PROTEIN 6A Genomic Order:  6038
Name:  ? Bradi2g50237 Secondary Identifier:  ? PAC:32772677
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g50237 0.5kb upstream 0.5kb upstream 6228 true Bd2: 49949138-49955365 Brachypodium distachyon
Bradi2g50237 0.5kb upstream 0.5kb upstream 500 false Bd2: 49954866-49955365 Brachypodium distachyon
Bradi2g50237 0.5kb downstream 0.5kb downstream 6228 true Bd2: 49948638-49954865 Brachypodium distachyon
Bradi2g50237 0.5kb downstream 0.5kb downstream 500 false Bd2: 49948638-49949137 Brachypodium distachyon
Bradi2g50237 1.0kb upstream 1.0kb upstream 6728 true Bd2: 49949138-49955865 Brachypodium distachyon
Bradi2g50237 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49954866-49955865 Brachypodium distachyon
Bradi2g50237 1.0kb downstream 1.0kb downstream 6728 true Bd2: 49948138-49954865 Brachypodium distachyon
Bradi2g50237 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49948138-49949137 Brachypodium distachyon
Bradi2g50237 2.0kb upstream 2.0kb upstream 7728 true Bd2: 49949138-49956865 Brachypodium distachyon
Bradi2g50237 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49954866-49956865 Brachypodium distachyon
Bradi2g50237 2.0kb downstream 2.0kb downstream 7728 true Bd2: 49947138-49954865 Brachypodium distachyon
Bradi2g50237 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49947138-49949137 Brachypodium distachyon
Bradi2g50237 5.0kb upstream 5.0kb upstream 10728 true Bd2: 49949138-49959865 Brachypodium distachyon
Bradi2g50237 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49954866-49959865 Brachypodium distachyon
Bradi2g50237 5.0kb downstream 5.0kb downstream 10728 true Bd2: 49944138-49954865 Brachypodium distachyon
Bradi2g50237 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49944138-49949137 Brachypodium distachyon
Bradi2g50237 10.0kb upstream 10.0kb upstream 15728 true Bd2: 49949138-49964865 Brachypodium distachyon
Bradi2g50237 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49954866-49964865 Brachypodium distachyon
Bradi2g50237 10.0kb downstream 10.0kb downstream 15728 true Bd2: 49939138-49954865 Brachypodium distachyon
Bradi2g50237 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49939138-49949137 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572781 5269 Grass View MSA
122043814 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.184        
cufflinks 4.441        
cufflinks 4.804        
cufflinks 5.215        
cufflinks 2.629       Low
cufflinks 4.025        
cufflinks 4.157        
cufflinks 3.099        
cufflinks 4.007        
cufflinks 4.499        
cufflinks 2.917        
cufflinks 3.24        
cufflinks 2.221       Low
cufflinks 2.013       Low
cufflinks 2.273       Low
cufflinks 3.018        
cufflinks 4.119        
cufflinks 7.258       High
cufflinks 5.126        
cufflinks 6.425       High
cufflinks 6.816       High
cufflinks 4.204        
cufflinks 3.75        
cufflinks 3.865        
cufflinks 5.162        
cufflinks 5.008        
cufflinks 4.031        
cufflinks 5.114        
cufflinks 4.525        
cufflinks 5.622        

0 Strain