Gene : Bradi2g50260 B. distachyon v3.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  6040
Name:  ? Bradi2g50260 Secondary Identifier:  ? PAC:32776536
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g50260 0.5kb upstream 0.5kb upstream 3442 true Bd2: 49969031-49972472 Brachypodium distachyon
Bradi2g50260 0.5kb upstream 0.5kb upstream 500 false Bd2: 49969031-49969530 Brachypodium distachyon
Bradi2g50260 0.5kb downstream 0.5kb downstream 3442 true Bd2: 49969531-49972972 Brachypodium distachyon
Bradi2g50260 0.5kb downstream 0.5kb downstream 500 false Bd2: 49972473-49972972 Brachypodium distachyon
Bradi2g50260 1.0kb upstream 1.0kb upstream 3942 true Bd2: 49968531-49972472 Brachypodium distachyon
Bradi2g50260 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49968531-49969530 Brachypodium distachyon
Bradi2g50260 1.0kb downstream 1.0kb downstream 3942 true Bd2: 49969531-49973472 Brachypodium distachyon
Bradi2g50260 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49972473-49973472 Brachypodium distachyon
Bradi2g50260 2.0kb upstream 2.0kb upstream 4942 true Bd2: 49967531-49972472 Brachypodium distachyon
Bradi2g50260 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49967531-49969530 Brachypodium distachyon
Bradi2g50260 2.0kb downstream 2.0kb downstream 4942 true Bd2: 49969531-49974472 Brachypodium distachyon
Bradi2g50260 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49972473-49974472 Brachypodium distachyon
Bradi2g50260 5.0kb upstream 5.0kb upstream 7942 true Bd2: 49964531-49972472 Brachypodium distachyon
Bradi2g50260 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49964531-49969530 Brachypodium distachyon
Bradi2g50260 5.0kb downstream 5.0kb downstream 7942 true Bd2: 49969531-49977472 Brachypodium distachyon
Bradi2g50260 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49972473-49977472 Brachypodium distachyon
Bradi2g50260 10.0kb upstream 10.0kb upstream 12942 true Bd2: 49959531-49972472 Brachypodium distachyon
Bradi2g50260 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49959531-49969530 Brachypodium distachyon
Bradi2g50260 10.0kb downstream 10.0kb downstream 12942 true Bd2: 49969531-49982472 Brachypodium distachyon
Bradi2g50260 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49972473-49982472 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572133 5269 Grass View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low Low
cufflinks 0.197        
cufflinks 0.09     Low  
cufflinks 0.091     Low  
cufflinks 0.133        
cufflinks 0.132        
cufflinks 0.395       High
cufflinks 0.077     Low  
cufflinks 0.137        
cufflinks 0.112        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.253        
cufflinks 0.085     Low  
cufflinks 1.231       High
cufflinks 0.238        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.017     High High
cufflinks 0.072     Low  
cufflinks 0.103        
cufflinks 0.039     Low  
cufflinks 0.178        
cufflinks 0.042     Low  
cufflinks 0.034     Low  
cufflinks 0.051     Low  
cufflinks 0.038     Low  
cufflinks 0.581       High

0 Strain