Gene : Bradi2g50460 B. distachyon v3.1
Defline:  (1 of 3) PTHR11119//PTHR11119:SF47 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  6064
Name:  ? Bradi2g50460 Secondary Identifier:  ? PAC:32777562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g50460 0.5kb upstream 0.5kb upstream 4243 true Bd2: 50131798-50136040 Brachypodium distachyon
Bradi2g50460 0.5kb upstream 0.5kb upstream 500 false Bd2: 50131798-50132297 Brachypodium distachyon
Bradi2g50460 0.5kb downstream 0.5kb downstream 4243 true Bd2: 50132298-50136540 Brachypodium distachyon
Bradi2g50460 0.5kb downstream 0.5kb downstream 500 false Bd2: 50136041-50136540 Brachypodium distachyon
Bradi2g50460 1.0kb upstream 1.0kb upstream 4743 true Bd2: 50131298-50136040 Brachypodium distachyon
Bradi2g50460 1.0kb upstream 1.0kb upstream 1000 false Bd2: 50131298-50132297 Brachypodium distachyon
Bradi2g50460 1.0kb downstream 1.0kb downstream 4743 true Bd2: 50132298-50137040 Brachypodium distachyon
Bradi2g50460 1.0kb downstream 1.0kb downstream 1000 false Bd2: 50136041-50137040 Brachypodium distachyon
Bradi2g50460 2.0kb upstream 2.0kb upstream 5743 true Bd2: 50130298-50136040 Brachypodium distachyon
Bradi2g50460 2.0kb upstream 2.0kb upstream 2000 false Bd2: 50130298-50132297 Brachypodium distachyon
Bradi2g50460 2.0kb downstream 2.0kb downstream 5743 true Bd2: 50132298-50138040 Brachypodium distachyon
Bradi2g50460 2.0kb downstream 2.0kb downstream 2000 false Bd2: 50136041-50138040 Brachypodium distachyon
Bradi2g50460 5.0kb upstream 5.0kb upstream 8743 true Bd2: 50127298-50136040 Brachypodium distachyon
Bradi2g50460 5.0kb upstream 5.0kb upstream 5000 false Bd2: 50127298-50132297 Brachypodium distachyon
Bradi2g50460 5.0kb downstream 5.0kb downstream 8743 true Bd2: 50132298-50141040 Brachypodium distachyon
Bradi2g50460 5.0kb downstream 5.0kb downstream 5000 false Bd2: 50136041-50141040 Brachypodium distachyon
Bradi2g50460 10.0kb upstream 10.0kb upstream 13743 true Bd2: 50122298-50136040 Brachypodium distachyon
Bradi2g50460 10.0kb upstream 10.0kb upstream 10000 false Bd2: 50122298-50132297 Brachypodium distachyon
Bradi2g50460 10.0kb downstream 10.0kb downstream 13743 true Bd2: 50132298-50146040 Brachypodium distachyon
Bradi2g50460 10.0kb downstream 10.0kb downstream 10000 false Bd2: 50136041-50146040 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569122 5269 Grass View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.13        
cufflinks 9.679        
cufflinks 8.795        
cufflinks 9.01        
cufflinks 1.089        
cufflinks 8.709        
cufflinks 8.12        
cufflinks 7.16        
cufflinks 7.246        
cufflinks 4.102        
cufflinks 0.037     Low Low
cufflinks 6.762        
cufflinks 0.004     Low Low
cufflinks 0.011     Low Low
cufflinks 1.459        
cufflinks 9.703     High  
cufflinks 5.843        
cufflinks 11.888     High  
cufflinks 3.82        
cufflinks 0.251        
cufflinks 5.643        
cufflinks 6.849        
cufflinks 5.411        
cufflinks 4.939        
cufflinks 6.37        
cufflinks 8.258        
cufflinks 0.013     Low Low
cufflinks 6.63        
cufflinks 7.541        
cufflinks 10.975        

0 Strain