Gene : Bradi4g16820 B. distachyon v3.1
Defline:  (1 of 1) PTHR12205 - CENTROMERE/KINETOCHORE PROTEIN ZW10 Genomic Order:  2257
Name:  ? Bradi4g16820 Secondary Identifier:  ? PAC:32785179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g16820 0.5kb upstream 0.5kb upstream 10062 true Bd4: 17676671-17686732 Brachypodium distachyon
Bradi4g16820 0.5kb upstream 0.5kb upstream 500 false Bd4: 17676671-17677170 Brachypodium distachyon
Bradi4g16820 0.5kb downstream 0.5kb downstream 10062 true Bd4: 17677171-17687232 Brachypodium distachyon
Bradi4g16820 0.5kb downstream 0.5kb downstream 500 false Bd4: 17686733-17687232 Brachypodium distachyon
Bradi4g16820 1.0kb upstream 1.0kb upstream 10562 true Bd4: 17676171-17686732 Brachypodium distachyon
Bradi4g16820 1.0kb upstream 1.0kb upstream 1000 false Bd4: 17676171-17677170 Brachypodium distachyon
Bradi4g16820 1.0kb downstream 1.0kb downstream 10562 true Bd4: 17677171-17687732 Brachypodium distachyon
Bradi4g16820 1.0kb downstream 1.0kb downstream 1000 false Bd4: 17686733-17687732 Brachypodium distachyon
Bradi4g16820 2.0kb upstream 2.0kb upstream 11562 true Bd4: 17675171-17686732 Brachypodium distachyon
Bradi4g16820 2.0kb upstream 2.0kb upstream 2000 false Bd4: 17675171-17677170 Brachypodium distachyon
Bradi4g16820 2.0kb downstream 2.0kb downstream 11562 true Bd4: 17677171-17688732 Brachypodium distachyon
Bradi4g16820 2.0kb downstream 2.0kb downstream 2000 false Bd4: 17686733-17688732 Brachypodium distachyon
Bradi4g16820 5.0kb upstream 5.0kb upstream 14562 true Bd4: 17672171-17686732 Brachypodium distachyon
Bradi4g16820 5.0kb upstream 5.0kb upstream 5000 false Bd4: 17672171-17677170 Brachypodium distachyon
Bradi4g16820 5.0kb downstream 5.0kb downstream 14562 true Bd4: 17677171-17691732 Brachypodium distachyon
Bradi4g16820 5.0kb downstream 5.0kb downstream 5000 false Bd4: 17686733-17691732 Brachypodium distachyon
Bradi4g16820 10.0kb upstream 10.0kb upstream 19562 true Bd4: 17667171-17686732 Brachypodium distachyon
Bradi4g16820 10.0kb upstream 10.0kb upstream 10000 false Bd4: 17667171-17677170 Brachypodium distachyon
Bradi4g16820 10.0kb downstream 10.0kb downstream 19562 true Bd4: 17677171-17696732 Brachypodium distachyon
Bradi4g16820 10.0kb downstream 10.0kb downstream 10000 false Bd4: 17686733-17696732 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582030 5269 Grass View MSA
122044913 5273 Angiosperm View MSA
121344793 5274 Embryophyte View MSA
123424483 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.919        
cufflinks 3.44        
cufflinks 3.642        
cufflinks 2.827        
cufflinks 1.491       Low
cufflinks 3.047        
cufflinks 3.013        
cufflinks 2.74        
cufflinks 3.044        
cufflinks 1.993        
cufflinks 2.24        
cufflinks 2.782        
cufflinks 1.605        
cufflinks 1.749        
cufflinks 1.763        
cufflinks 3.262        
cufflinks 2.338        
cufflinks 5.969       High
cufflinks 4.514       High
cufflinks 1.005       Low
cufflinks 3.463        
cufflinks 3.596        
cufflinks 2.772        
cufflinks 2.838        
cufflinks 2.985        
cufflinks 3.325        
cufflinks 2.147        
cufflinks 3.046        
cufflinks 3.231        
cufflinks 3.933        

0 Strain