Gene : Bradi2g51130 B. distachyon v3.1
Defline:  (1 of 1) PTHR10795:SF439 - SERINE PROTEINASE-RELATED Genomic Order:  6143
Name:  ? Bradi2g51130 Secondary Identifier:  ? PAC:32773166
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g51130 0.5kb upstream 0.5kb upstream 7191 true Bd2: 50555750-50562940 Brachypodium distachyon
Bradi2g51130 0.5kb upstream 0.5kb upstream 500 false Bd2: 50555750-50556249 Brachypodium distachyon
Bradi2g51130 0.5kb downstream 0.5kb downstream 7191 true Bd2: 50556250-50563440 Brachypodium distachyon
Bradi2g51130 0.5kb downstream 0.5kb downstream 500 false Bd2: 50562941-50563440 Brachypodium distachyon
Bradi2g51130 1.0kb upstream 1.0kb upstream 7691 true Bd2: 50555250-50562940 Brachypodium distachyon
Bradi2g51130 1.0kb upstream 1.0kb upstream 1000 false Bd2: 50555250-50556249 Brachypodium distachyon
Bradi2g51130 1.0kb downstream 1.0kb downstream 7691 true Bd2: 50556250-50563940 Brachypodium distachyon
Bradi2g51130 1.0kb downstream 1.0kb downstream 1000 false Bd2: 50562941-50563940 Brachypodium distachyon
Bradi2g51130 2.0kb upstream 2.0kb upstream 8691 true Bd2: 50554250-50562940 Brachypodium distachyon
Bradi2g51130 2.0kb upstream 2.0kb upstream 2000 false Bd2: 50554250-50556249 Brachypodium distachyon
Bradi2g51130 2.0kb downstream 2.0kb downstream 8691 true Bd2: 50556250-50564940 Brachypodium distachyon
Bradi2g51130 2.0kb downstream 2.0kb downstream 2000 false Bd2: 50562941-50564940 Brachypodium distachyon
Bradi2g51130 5.0kb upstream 5.0kb upstream 11691 true Bd2: 50551250-50562940 Brachypodium distachyon
Bradi2g51130 5.0kb upstream 5.0kb upstream 5000 false Bd2: 50551250-50556249 Brachypodium distachyon
Bradi2g51130 5.0kb downstream 5.0kb downstream 11691 true Bd2: 50556250-50567940 Brachypodium distachyon
Bradi2g51130 5.0kb downstream 5.0kb downstream 5000 false Bd2: 50562941-50567940 Brachypodium distachyon
Bradi2g51130 10.0kb upstream 10.0kb upstream 16691 true Bd2: 50546250-50562940 Brachypodium distachyon
Bradi2g51130 10.0kb upstream 10.0kb upstream 10000 false Bd2: 50546250-50556249 Brachypodium distachyon
Bradi2g51130 10.0kb downstream 10.0kb downstream 16691 true Bd2: 50556250-50572940 Brachypodium distachyon
Bradi2g51130 10.0kb downstream 10.0kb downstream 10000 false Bd2: 50562941-50572940 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568545 5269 Grass View MSA
122043017 5273 Angiosperm View MSA
121352132 5274 Embryophyte View MSA
123382560 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.627        
cufflinks 6.277        
cufflinks 6.959        
cufflinks 5.499        
cufflinks 10.702     High High
cufflinks 5.728        
cufflinks 5.278        
cufflinks 6.802        
cufflinks 6.456        
cufflinks 4.856        
cufflinks 2.596       Low
cufflinks 6.237        
cufflinks 3.306       Low
cufflinks 2.217       Low
cufflinks 4.182        
cufflinks 5.309        
cufflinks 4.563        
cufflinks 9.302       High
cufflinks 9.704       High
cufflinks 2.591       Low
cufflinks 4.616        
cufflinks 7.29        
cufflinks 6.745        
cufflinks 5.505        
cufflinks 4.431        
cufflinks 6.565        
cufflinks 2.983       Low
cufflinks 5.997        
cufflinks 6.173        
cufflinks 8.247       High

0 Strain