Gene : Bradi2g56537 B. distachyon v3.1
Defline:  (1 of 1) PTHR10133:SF38 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  6802
Name:  ? Bradi2g56537 Secondary Identifier:  ? PAC:32782296
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g56537 0.5kb upstream 0.5kb upstream 3888 true Bd2: 54653454-54657341 Brachypodium distachyon
Bradi2g56537 0.5kb upstream 0.5kb upstream 500 false Bd2: 54656842-54657341 Brachypodium distachyon
Bradi2g56537 0.5kb downstream 0.5kb downstream 3888 true Bd2: 54652954-54656841 Brachypodium distachyon
Bradi2g56537 0.5kb downstream 0.5kb downstream 500 false Bd2: 54652954-54653453 Brachypodium distachyon
Bradi2g56537 1.0kb upstream 1.0kb upstream 4388 true Bd2: 54653454-54657841 Brachypodium distachyon
Bradi2g56537 1.0kb upstream 1.0kb upstream 1000 false Bd2: 54656842-54657841 Brachypodium distachyon
Bradi2g56537 1.0kb downstream 1.0kb downstream 4388 true Bd2: 54652454-54656841 Brachypodium distachyon
Bradi2g56537 1.0kb downstream 1.0kb downstream 1000 false Bd2: 54652454-54653453 Brachypodium distachyon
Bradi2g56537 2.0kb upstream 2.0kb upstream 5388 true Bd2: 54653454-54658841 Brachypodium distachyon
Bradi2g56537 2.0kb upstream 2.0kb upstream 2000 false Bd2: 54656842-54658841 Brachypodium distachyon
Bradi2g56537 2.0kb downstream 2.0kb downstream 5388 true Bd2: 54651454-54656841 Brachypodium distachyon
Bradi2g56537 2.0kb downstream 2.0kb downstream 2000 false Bd2: 54651454-54653453 Brachypodium distachyon
Bradi2g56537 5.0kb upstream 5.0kb upstream 8388 true Bd2: 54653454-54661841 Brachypodium distachyon
Bradi2g56537 5.0kb upstream 5.0kb upstream 5000 false Bd2: 54656842-54661841 Brachypodium distachyon
Bradi2g56537 5.0kb downstream 5.0kb downstream 8388 true Bd2: 54648454-54656841 Brachypodium distachyon
Bradi2g56537 5.0kb downstream 5.0kb downstream 5000 false Bd2: 54648454-54653453 Brachypodium distachyon
Bradi2g56537 10.0kb upstream 10.0kb upstream 13388 true Bd2: 54653454-54666841 Brachypodium distachyon
Bradi2g56537 10.0kb upstream 10.0kb upstream 10000 false Bd2: 54656842-54666841 Brachypodium distachyon
Bradi2g56537 10.0kb downstream 10.0kb downstream 13388 true Bd2: 54643454-54656841 Brachypodium distachyon
Bradi2g56537 10.0kb downstream 10.0kb downstream 10000 false Bd2: 54643454-54653453 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041187 5273 Angiosperm View MSA
124572689 5269 Grass View MSA
121344159 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.117        
cufflinks 2.855       High
cufflinks 2.201        
cufflinks 3.115       High
cufflinks 0.774        
cufflinks 2.161        
cufflinks 2.664       High
cufflinks 1.28        
cufflinks 1.611        
cufflinks 1.574        
cufflinks 1.841        
cufflinks 1.436        
cufflinks 0.992        
cufflinks 1.438        
cufflinks 0.951        
cufflinks 2.392        
cufflinks 1.355        
cufflinks 0.276       Low
cufflinks 0.738        
cufflinks 0.208       Low
cufflinks 0.974        
cufflinks 1.487        
cufflinks 1.104        
cufflinks 1.529        
cufflinks 2.401        
cufflinks 1.973        
cufflinks 0.687        
cufflinks 1.763        
cufflinks 1.838        
cufflinks 1.582        

0 Strain