Gene : Bradi2g56780 B. distachyon v3.1
Defline:  (1 of 2) 1.13.11.29 - Stizolobate synthase Genomic Order:  6832
Name:  ? Bradi2g56780 Secondary Identifier:  ? PAC:32782358
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g56780 0.5kb upstream 0.5kb upstream 4708 true Bd2: 54822319-54827026 Brachypodium distachyon
Bradi2g56780 0.5kb upstream 0.5kb upstream 500 false Bd2: 54826527-54827026 Brachypodium distachyon
Bradi2g56780 0.5kb downstream 0.5kb downstream 4708 true Bd2: 54821819-54826526 Brachypodium distachyon
Bradi2g56780 0.5kb downstream 0.5kb downstream 500 false Bd2: 54821819-54822318 Brachypodium distachyon
Bradi2g56780 1.0kb upstream 1.0kb upstream 5208 true Bd2: 54822319-54827526 Brachypodium distachyon
Bradi2g56780 1.0kb upstream 1.0kb upstream 1000 false Bd2: 54826527-54827526 Brachypodium distachyon
Bradi2g56780 1.0kb downstream 1.0kb downstream 5208 true Bd2: 54821319-54826526 Brachypodium distachyon
Bradi2g56780 1.0kb downstream 1.0kb downstream 1000 false Bd2: 54821319-54822318 Brachypodium distachyon
Bradi2g56780 2.0kb upstream 2.0kb upstream 6208 true Bd2: 54822319-54828526 Brachypodium distachyon
Bradi2g56780 2.0kb upstream 2.0kb upstream 2000 false Bd2: 54826527-54828526 Brachypodium distachyon
Bradi2g56780 2.0kb downstream 2.0kb downstream 6208 true Bd2: 54820319-54826526 Brachypodium distachyon
Bradi2g56780 2.0kb downstream 2.0kb downstream 2000 false Bd2: 54820319-54822318 Brachypodium distachyon
Bradi2g56780 5.0kb upstream 5.0kb upstream 9208 true Bd2: 54822319-54831526 Brachypodium distachyon
Bradi2g56780 5.0kb upstream 5.0kb upstream 5000 false Bd2: 54826527-54831526 Brachypodium distachyon
Bradi2g56780 5.0kb downstream 5.0kb downstream 9208 true Bd2: 54817319-54826526 Brachypodium distachyon
Bradi2g56780 5.0kb downstream 5.0kb downstream 5000 false Bd2: 54817319-54822318 Brachypodium distachyon
Bradi2g56780 10.0kb upstream 10.0kb upstream 14208 true Bd2: 54822319-54836526 Brachypodium distachyon
Bradi2g56780 10.0kb upstream 10.0kb upstream 10000 false Bd2: 54826527-54836526 Brachypodium distachyon
Bradi2g56780 10.0kb downstream 10.0kb downstream 14208 true Bd2: 54812319-54826526 Brachypodium distachyon
Bradi2g56780 10.0kb downstream 10.0kb downstream 10000 false Bd2: 54812319-54822318 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588785 5269 Grass View MSA
122046323 5273 Angiosperm View MSA
121350065 5274 Embryophyte View MSA
123426386 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.494        
cufflinks 1.602        
cufflinks 2.049        
cufflinks 1.993        
cufflinks 4.569       High
cufflinks 1.559        
cufflinks 2.057        
cufflinks 2.263        
cufflinks 2.114        
cufflinks 2.248        
cufflinks 0.816       Low
cufflinks 1.548        
cufflinks 1.013        
cufflinks 0.491       Low
cufflinks 2.414        
cufflinks 1.676        
cufflinks 2.256        
cufflinks 5.634       High
cufflinks 4.138        
cufflinks 2.855        
cufflinks 10.643       High
cufflinks 1.469        
cufflinks 2.273        
cufflinks 2.262        
cufflinks 1.937        
cufflinks 1.724        
cufflinks 0.196       Low
cufflinks 2.335        
cufflinks 1.827        
cufflinks 4.906       High

0 Strain