Gene : Bradi2g56826 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  6842
Name:  ? Bradi2g56826 Secondary Identifier:  ? PAC:32775610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g56826 0.5kb upstream 0.5kb upstream 7209 true Bd2: 54874282-54881490 Brachypodium distachyon
Bradi2g56826 0.5kb upstream 0.5kb upstream 500 false Bd2: 54874282-54874781 Brachypodium distachyon
Bradi2g56826 0.5kb downstream 0.5kb downstream 7209 true Bd2: 54874782-54881990 Brachypodium distachyon
Bradi2g56826 0.5kb downstream 0.5kb downstream 500 false Bd2: 54881491-54881990 Brachypodium distachyon
Bradi2g56826 1.0kb upstream 1.0kb upstream 7709 true Bd2: 54873782-54881490 Brachypodium distachyon
Bradi2g56826 1.0kb upstream 1.0kb upstream 1000 false Bd2: 54873782-54874781 Brachypodium distachyon
Bradi2g56826 1.0kb downstream 1.0kb downstream 7709 true Bd2: 54874782-54882490 Brachypodium distachyon
Bradi2g56826 1.0kb downstream 1.0kb downstream 1000 false Bd2: 54881491-54882490 Brachypodium distachyon
Bradi2g56826 2.0kb upstream 2.0kb upstream 8709 true Bd2: 54872782-54881490 Brachypodium distachyon
Bradi2g56826 2.0kb upstream 2.0kb upstream 2000 false Bd2: 54872782-54874781 Brachypodium distachyon
Bradi2g56826 2.0kb downstream 2.0kb downstream 8709 true Bd2: 54874782-54883490 Brachypodium distachyon
Bradi2g56826 2.0kb downstream 2.0kb downstream 2000 false Bd2: 54881491-54883490 Brachypodium distachyon
Bradi2g56826 5.0kb upstream 5.0kb upstream 11709 true Bd2: 54869782-54881490 Brachypodium distachyon
Bradi2g56826 5.0kb upstream 5.0kb upstream 5000 false Bd2: 54869782-54874781 Brachypodium distachyon
Bradi2g56826 5.0kb downstream 5.0kb downstream 11709 true Bd2: 54874782-54886490 Brachypodium distachyon
Bradi2g56826 5.0kb downstream 5.0kb downstream 5000 false Bd2: 54881491-54886490 Brachypodium distachyon
Bradi2g56826 10.0kb upstream 10.0kb upstream 16709 true Bd2: 54864782-54881490 Brachypodium distachyon
Bradi2g56826 10.0kb upstream 10.0kb upstream 10000 false Bd2: 54864782-54874781 Brachypodium distachyon
Bradi2g56826 10.0kb downstream 10.0kb downstream 16709 true Bd2: 54874782-54891490 Brachypodium distachyon
Bradi2g56826 10.0kb downstream 10.0kb downstream 10000 false Bd2: 54881491-54891490 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.006     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain