Gene : Bradi2g57250 B. distachyon v3.1
Defline:  (1 of 6) KOG4249 - Uncharacterized conserved protein Genomic Order:  6893
Name:  ? Bradi2g57250 Secondary Identifier:  ? PAC:32774992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g57250 0.5kb upstream 0.5kb upstream 5192 true Bd2: 55232830-55238021 Brachypodium distachyon
Bradi2g57250 0.5kb upstream 0.5kb upstream 500 false Bd2: 55232830-55233329 Brachypodium distachyon
Bradi2g57250 0.5kb downstream 0.5kb downstream 5192 true Bd2: 55233330-55238521 Brachypodium distachyon
Bradi2g57250 0.5kb downstream 0.5kb downstream 500 false Bd2: 55238022-55238521 Brachypodium distachyon
Bradi2g57250 1.0kb upstream 1.0kb upstream 5692 true Bd2: 55232330-55238021 Brachypodium distachyon
Bradi2g57250 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55232330-55233329 Brachypodium distachyon
Bradi2g57250 1.0kb downstream 1.0kb downstream 5692 true Bd2: 55233330-55239021 Brachypodium distachyon
Bradi2g57250 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55238022-55239021 Brachypodium distachyon
Bradi2g57250 2.0kb upstream 2.0kb upstream 6692 true Bd2: 55231330-55238021 Brachypodium distachyon
Bradi2g57250 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55231330-55233329 Brachypodium distachyon
Bradi2g57250 2.0kb downstream 2.0kb downstream 6692 true Bd2: 55233330-55240021 Brachypodium distachyon
Bradi2g57250 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55238022-55240021 Brachypodium distachyon
Bradi2g57250 5.0kb upstream 5.0kb upstream 9692 true Bd2: 55228330-55238021 Brachypodium distachyon
Bradi2g57250 5.0kb upstream 5.0kb upstream 5000 false Bd2: 55228330-55233329 Brachypodium distachyon
Bradi2g57250 5.0kb downstream 5.0kb downstream 9692 true Bd2: 55233330-55243021 Brachypodium distachyon
Bradi2g57250 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55238022-55243021 Brachypodium distachyon
Bradi2g57250 10.0kb upstream 10.0kb upstream 14692 true Bd2: 55223330-55238021 Brachypodium distachyon
Bradi2g57250 10.0kb upstream 10.0kb upstream 10000 false Bd2: 55223330-55233329 Brachypodium distachyon
Bradi2g57250 10.0kb downstream 10.0kb downstream 14692 true Bd2: 55233330-55248021 Brachypodium distachyon
Bradi2g57250 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55238022-55248021 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568990 5269 Grass View MSA
122042067 5273 Angiosperm View MSA
121346127 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.686     High  
cufflinks 9.604        
cufflinks 7.819        
cufflinks 7.053        
cufflinks 11.985     High  
cufflinks 10.746     High  
cufflinks 10.163     High  
cufflinks 7.347        
cufflinks 9.87     High  
cufflinks 5.235       Low
cufflinks 9.866     High  
cufflinks 10.308     High  
cufflinks 7.715     High  
cufflinks 6.465        
cufflinks 6.727        
cufflinks 10.221     High  
cufflinks 7.928        
cufflinks 9.266        
cufflinks 18.575     High High
cufflinks 14.189     High High
cufflinks 9.303        
cufflinks 6.531        
cufflinks 7.408        
cufflinks 9.976     High  
cufflinks 9.552        
cufflinks 7.066        
cufflinks 10.204     High  
cufflinks 6.274        
cufflinks 5.719       Low
cufflinks 17.152     High High

0 Strain