Gene : Bradi4g22230 B. distachyon v3.1
Defline:  (1 of 1) PTHR11817//PTHR11817:SF29 - PYRUVATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  2836
Name:  ? Bradi4g22230 Secondary Identifier:  ? PAC:32787202
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ANAEROFRUCAT-PWY Brachypodium distachyon pathologic  
Bdistachyon ANAGLYCOLYSIS-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-1042 Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon PWY-5723 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g22230 0.5kb upstream 0.5kb upstream 7111 true Bd4: 26332909-26340019 Brachypodium distachyon
Bradi4g22230 0.5kb upstream 0.5kb upstream 500 false Bd4: 26339520-26340019 Brachypodium distachyon
Bradi4g22230 0.5kb downstream 0.5kb downstream 7111 true Bd4: 26332409-26339519 Brachypodium distachyon
Bradi4g22230 0.5kb downstream 0.5kb downstream 500 false Bd4: 26332409-26332908 Brachypodium distachyon
Bradi4g22230 1.0kb upstream 1.0kb upstream 7611 true Bd4: 26332909-26340519 Brachypodium distachyon
Bradi4g22230 1.0kb upstream 1.0kb upstream 1000 false Bd4: 26339520-26340519 Brachypodium distachyon
Bradi4g22230 1.0kb downstream 1.0kb downstream 7611 true Bd4: 26331909-26339519 Brachypodium distachyon
Bradi4g22230 1.0kb downstream 1.0kb downstream 1000 false Bd4: 26331909-26332908 Brachypodium distachyon
Bradi4g22230 2.0kb upstream 2.0kb upstream 8611 true Bd4: 26332909-26341519 Brachypodium distachyon
Bradi4g22230 2.0kb upstream 2.0kb upstream 2000 false Bd4: 26339520-26341519 Brachypodium distachyon
Bradi4g22230 2.0kb downstream 2.0kb downstream 8611 true Bd4: 26330909-26339519 Brachypodium distachyon
Bradi4g22230 2.0kb downstream 2.0kb downstream 2000 false Bd4: 26330909-26332908 Brachypodium distachyon
Bradi4g22230 5.0kb upstream 5.0kb upstream 11611 true Bd4: 26332909-26344519 Brachypodium distachyon
Bradi4g22230 5.0kb upstream 5.0kb upstream 5000 false Bd4: 26339520-26344519 Brachypodium distachyon
Bradi4g22230 5.0kb downstream 5.0kb downstream 11611 true Bd4: 26327909-26339519 Brachypodium distachyon
Bradi4g22230 5.0kb downstream 5.0kb downstream 5000 false Bd4: 26327909-26332908 Brachypodium distachyon
Bradi4g22230 10.0kb upstream 10.0kb upstream 16611 true Bd4: 26332909-26349519 Brachypodium distachyon
Bradi4g22230 10.0kb upstream 10.0kb upstream 10000 false Bd4: 26339520-26349519 Brachypodium distachyon
Bradi4g22230 10.0kb downstream 10.0kb downstream 16611 true Bd4: 26322909-26339519 Brachypodium distachyon
Bradi4g22230 10.0kb downstream 10.0kb downstream 10000 false Bd4: 26322909-26332908 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568562 5269 Grass View MSA
122050300 5273 Angiosperm View MSA
121311846 5274 Embryophyte View MSA
123427832 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.331        
cufflinks 3.1        
cufflinks 3.569        
cufflinks 2.879        
cufflinks 2.814        
cufflinks 2.756        
cufflinks 2.477        
cufflinks 2.54        
cufflinks 2.664        
cufflinks 2.306        
cufflinks 2.141        
cufflinks 3.285        
cufflinks 1.368       Low
cufflinks 1.615       Low
cufflinks 3.476        
cufflinks 3.595        
cufflinks 3.379        
cufflinks 11.767     High High
cufflinks 3.425        
cufflinks 6.176       High
cufflinks 4.852        
cufflinks 3.552        
cufflinks 2.54        
cufflinks 2.584        
cufflinks 2.113        
cufflinks 3.375        
cufflinks 1.957       Low
cufflinks 2.954        
cufflinks 3.283        
cufflinks 4.885        

0 Strain