Gene : Bradi2g57330 B. distachyon v3.1
Defline:  (1 of 1) K07179 - RIO kinase 2 (RIOK2) Genomic Order:  6901
Name:  ? Bradi2g57330 Secondary Identifier:  ? PAC:32771911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g57330 0.5kb upstream 0.5kb upstream 5428 true Bd2: 55283836-55289263 Brachypodium distachyon
Bradi2g57330 0.5kb upstream 0.5kb upstream 500 false Bd2: 55288764-55289263 Brachypodium distachyon
Bradi2g57330 0.5kb downstream 0.5kb downstream 5428 true Bd2: 55283336-55288763 Brachypodium distachyon
Bradi2g57330 0.5kb downstream 0.5kb downstream 500 false Bd2: 55283336-55283835 Brachypodium distachyon
Bradi2g57330 1.0kb upstream 1.0kb upstream 5928 true Bd2: 55283836-55289763 Brachypodium distachyon
Bradi2g57330 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55288764-55289763 Brachypodium distachyon
Bradi2g57330 1.0kb downstream 1.0kb downstream 5928 true Bd2: 55282836-55288763 Brachypodium distachyon
Bradi2g57330 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55282836-55283835 Brachypodium distachyon
Bradi2g57330 2.0kb upstream 2.0kb upstream 6928 true Bd2: 55283836-55290763 Brachypodium distachyon
Bradi2g57330 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55288764-55290763 Brachypodium distachyon
Bradi2g57330 2.0kb downstream 2.0kb downstream 6928 true Bd2: 55281836-55288763 Brachypodium distachyon
Bradi2g57330 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55281836-55283835 Brachypodium distachyon
Bradi2g57330 5.0kb upstream 5.0kb upstream 9928 true Bd2: 55283836-55293763 Brachypodium distachyon
Bradi2g57330 5.0kb upstream 5.0kb upstream 5000 false Bd2: 55288764-55293763 Brachypodium distachyon
Bradi2g57330 5.0kb downstream 5.0kb downstream 9928 true Bd2: 55278836-55288763 Brachypodium distachyon
Bradi2g57330 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55278836-55283835 Brachypodium distachyon
Bradi2g57330 10.0kb upstream 10.0kb upstream 14928 true Bd2: 55283836-55298763 Brachypodium distachyon
Bradi2g57330 10.0kb upstream 10.0kb upstream 10000 false Bd2: 55288764-55298763 Brachypodium distachyon
Bradi2g57330 10.0kb downstream 10.0kb downstream 14928 true Bd2: 55273836-55288763 Brachypodium distachyon
Bradi2g57330 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55273836-55283835 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574834 5269 Grass View MSA
122045504 5273 Angiosperm View MSA
121346545 5274 Embryophyte View MSA
123428706 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.302        
cufflinks 3.573        
cufflinks 3.877        
cufflinks 3.505        
cufflinks 2.363        
cufflinks 3.094        
cufflinks 3.016        
cufflinks 2.779        
cufflinks 3.078        
cufflinks 2.536        
cufflinks 3.091        
cufflinks 2.567        
cufflinks 1.654       Low
cufflinks 2.188        
cufflinks 2.715        
cufflinks 2.785        
cufflinks 2.823        
cufflinks 4.532       High
cufflinks 4.214        
cufflinks 0.843       Low
cufflinks 4.39       High
cufflinks 2.9        
cufflinks 2.933        
cufflinks 3.136        
cufflinks 3.48        
cufflinks 3.183        
cufflinks 2.733        
cufflinks 3.152        
cufflinks 2.953        
cufflinks 3.746        

0 Strain