Gene : Bradi4g22405 B. distachyon v3.1
Defline:  (1 of 4) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE Genomic Order:  2850
Name:  ? Bradi4g22405 Secondary Identifier:  ? PAC:32790285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g22405 0.5kb upstream 0.5kb upstream 7222 true Bd4: 26413310-26420531 Brachypodium distachyon
Bradi4g22405 0.5kb upstream 0.5kb upstream 500 false Bd4: 26413310-26413809 Brachypodium distachyon
Bradi4g22405 0.5kb downstream 0.5kb downstream 7222 true Bd4: 26413810-26421031 Brachypodium distachyon
Bradi4g22405 0.5kb downstream 0.5kb downstream 500 false Bd4: 26420532-26421031 Brachypodium distachyon
Bradi4g22405 1.0kb upstream 1.0kb upstream 7722 true Bd4: 26412810-26420531 Brachypodium distachyon
Bradi4g22405 1.0kb upstream 1.0kb upstream 1000 false Bd4: 26412810-26413809 Brachypodium distachyon
Bradi4g22405 1.0kb downstream 1.0kb downstream 7722 true Bd4: 26413810-26421531 Brachypodium distachyon
Bradi4g22405 1.0kb downstream 1.0kb downstream 1000 false Bd4: 26420532-26421531 Brachypodium distachyon
Bradi4g22405 2.0kb upstream 2.0kb upstream 8722 true Bd4: 26411810-26420531 Brachypodium distachyon
Bradi4g22405 2.0kb upstream 2.0kb upstream 2000 false Bd4: 26411810-26413809 Brachypodium distachyon
Bradi4g22405 2.0kb downstream 2.0kb downstream 8722 true Bd4: 26413810-26422531 Brachypodium distachyon
Bradi4g22405 2.0kb downstream 2.0kb downstream 2000 false Bd4: 26420532-26422531 Brachypodium distachyon
Bradi4g22405 5.0kb upstream 5.0kb upstream 11722 true Bd4: 26408810-26420531 Brachypodium distachyon
Bradi4g22405 5.0kb upstream 5.0kb upstream 5000 false Bd4: 26408810-26413809 Brachypodium distachyon
Bradi4g22405 5.0kb downstream 5.0kb downstream 11722 true Bd4: 26413810-26425531 Brachypodium distachyon
Bradi4g22405 5.0kb downstream 5.0kb downstream 5000 false Bd4: 26420532-26425531 Brachypodium distachyon
Bradi4g22405 10.0kb upstream 10.0kb upstream 16722 true Bd4: 26403810-26420531 Brachypodium distachyon
Bradi4g22405 10.0kb upstream 10.0kb upstream 10000 false Bd4: 26403810-26413809 Brachypodium distachyon
Bradi4g22405 10.0kb downstream 10.0kb downstream 16722 true Bd4: 26413810-26430531 Brachypodium distachyon
Bradi4g22405 10.0kb downstream 10.0kb downstream 10000 false Bd4: 26420532-26430531 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581726 5269 Grass View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.163        
cufflinks 0.228        
cufflinks 0.288        
cufflinks 0.27        
cufflinks 0.165        
cufflinks 0.203        
cufflinks 0.204        
cufflinks 0.217        
cufflinks 0.227        
cufflinks 0.285        
cufflinks 0.164        
cufflinks 0.187        
cufflinks 0.147        
cufflinks 0.18        
cufflinks 0.19        
cufflinks 0.191        
cufflinks 0.195        
cufflinks 0.28        
cufflinks 0.282        
cufflinks 0.064     Low Low
cufflinks 0.387       High
cufflinks 0.245        
cufflinks 0.206        
cufflinks 0.205        
cufflinks 0.233        
cufflinks 0.328       High
cufflinks 0.213        
cufflinks 0.302        
cufflinks 0.258        
cufflinks 0.339       High

0 Strain