Gene : Bradi4g22347 B. distachyon v3.1
Defline:  (1 of 4) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE Genomic Order:  2849
Name:  ? Bradi4g22347 Secondary Identifier:  ? PAC:32785745
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g22347 0.5kb upstream 0.5kb upstream 9040 true Bd4: 26404020-26413059 Brachypodium distachyon
Bradi4g22347 0.5kb upstream 0.5kb upstream 500 false Bd4: 26404020-26404519 Brachypodium distachyon
Bradi4g22347 0.5kb downstream 0.5kb downstream 9040 true Bd4: 26404520-26413559 Brachypodium distachyon
Bradi4g22347 0.5kb downstream 0.5kb downstream 500 false Bd4: 26413060-26413559 Brachypodium distachyon
Bradi4g22347 1.0kb upstream 1.0kb upstream 9540 true Bd4: 26403520-26413059 Brachypodium distachyon
Bradi4g22347 1.0kb upstream 1.0kb upstream 1000 false Bd4: 26403520-26404519 Brachypodium distachyon
Bradi4g22347 1.0kb downstream 1.0kb downstream 9540 true Bd4: 26404520-26414059 Brachypodium distachyon
Bradi4g22347 1.0kb downstream 1.0kb downstream 1000 false Bd4: 26413060-26414059 Brachypodium distachyon
Bradi4g22347 2.0kb upstream 2.0kb upstream 10540 true Bd4: 26402520-26413059 Brachypodium distachyon
Bradi4g22347 2.0kb upstream 2.0kb upstream 2000 false Bd4: 26402520-26404519 Brachypodium distachyon
Bradi4g22347 2.0kb downstream 2.0kb downstream 10540 true Bd4: 26404520-26415059 Brachypodium distachyon
Bradi4g22347 2.0kb downstream 2.0kb downstream 2000 false Bd4: 26413060-26415059 Brachypodium distachyon
Bradi4g22347 5.0kb upstream 5.0kb upstream 13540 true Bd4: 26399520-26413059 Brachypodium distachyon
Bradi4g22347 5.0kb upstream 5.0kb upstream 5000 false Bd4: 26399520-26404519 Brachypodium distachyon
Bradi4g22347 5.0kb downstream 5.0kb downstream 13540 true Bd4: 26404520-26418059 Brachypodium distachyon
Bradi4g22347 5.0kb downstream 5.0kb downstream 5000 false Bd4: 26413060-26418059 Brachypodium distachyon
Bradi4g22347 10.0kb upstream 10.0kb upstream 18540 true Bd4: 26394520-26413059 Brachypodium distachyon
Bradi4g22347 10.0kb upstream 10.0kb upstream 10000 false Bd4: 26394520-26404519 Brachypodium distachyon
Bradi4g22347 10.0kb downstream 10.0kb downstream 18540 true Bd4: 26404520-26423059 Brachypodium distachyon
Bradi4g22347 10.0kb downstream 10.0kb downstream 10000 false Bd4: 26413060-26423059 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581726 5269 Grass View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.229        
cufflinks 0.324        
cufflinks 0.258        
cufflinks 0.343        
cufflinks 0.123       Low
cufflinks 0.277        
cufflinks 0.285        
cufflinks 0.257        
cufflinks 0.286        
cufflinks 0.251        
cufflinks 0.136       Low
cufflinks 0.252        
cufflinks 0.156        
cufflinks 0.152        
cufflinks 0.233        
cufflinks 0.271        
cufflinks 0.263        
cufflinks 0.408       High
cufflinks 0.171     Low  
cufflinks 0.06     Low Low
cufflinks 0.262        
cufflinks 0.248        
cufflinks 0.252        
cufflinks 0.279        
cufflinks 0.327        
cufflinks 0.26        
cufflinks 0.174        
cufflinks 0.213        
cufflinks 0.228        
cufflinks 0.328        

0 Strain