Gene : Bradi2g57510 B. distachyon v3.1
Defline:  (1 of 1) PTHR13077:SF6 - 15 KDA SELENOPROTEIN Genomic Order:  6932
Name:  ? Bradi2g57510 Secondary Identifier:  ? PAC:32781502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g57510 0.5kb upstream 0.5kb upstream 3301 true Bd2: 55450637-55453937 Brachypodium distachyon
Bradi2g57510 0.5kb upstream 0.5kb upstream 500 false Bd2: 55450637-55451136 Brachypodium distachyon
Bradi2g57510 0.5kb downstream 0.5kb downstream 3301 true Bd2: 55451137-55454437 Brachypodium distachyon
Bradi2g57510 0.5kb downstream 0.5kb downstream 500 false Bd2: 55453938-55454437 Brachypodium distachyon
Bradi2g57510 1.0kb upstream 1.0kb upstream 3801 true Bd2: 55450137-55453937 Brachypodium distachyon
Bradi2g57510 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55450137-55451136 Brachypodium distachyon
Bradi2g57510 1.0kb downstream 1.0kb downstream 3801 true Bd2: 55451137-55454937 Brachypodium distachyon
Bradi2g57510 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55453938-55454937 Brachypodium distachyon
Bradi2g57510 2.0kb upstream 2.0kb upstream 4801 true Bd2: 55449137-55453937 Brachypodium distachyon
Bradi2g57510 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55449137-55451136 Brachypodium distachyon
Bradi2g57510 2.0kb downstream 2.0kb downstream 4801 true Bd2: 55451137-55455937 Brachypodium distachyon
Bradi2g57510 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55453938-55455937 Brachypodium distachyon
Bradi2g57510 5.0kb upstream 5.0kb upstream 7801 true Bd2: 55446137-55453937 Brachypodium distachyon
Bradi2g57510 5.0kb upstream 5.0kb upstream 5000 false Bd2: 55446137-55451136 Brachypodium distachyon
Bradi2g57510 5.0kb downstream 5.0kb downstream 7801 true Bd2: 55451137-55458937 Brachypodium distachyon
Bradi2g57510 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55453938-55458937 Brachypodium distachyon
Bradi2g57510 10.0kb upstream 10.0kb upstream 12801 true Bd2: 55441137-55453937 Brachypodium distachyon
Bradi2g57510 10.0kb upstream 10.0kb upstream 10000 false Bd2: 55441137-55451136 Brachypodium distachyon
Bradi2g57510 10.0kb downstream 10.0kb downstream 12801 true Bd2: 55451137-55463937 Brachypodium distachyon
Bradi2g57510 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55453938-55463937 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580731 5269 Grass View MSA
122044015 5273 Angiosperm View MSA
121346057 5274 Embryophyte View MSA
123424520 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.502     High  
cufflinks 9.674        
cufflinks 11.816     High  
cufflinks 14.503     High  
cufflinks 22.453     High  
cufflinks 8.927        
cufflinks 9.497        
cufflinks 9.652     High  
cufflinks 9.895     High  
cufflinks 26.547     High High
cufflinks 8.393       Low
cufflinks 7.188       Low
cufflinks 6.868       Low
cufflinks 8.696     High Low
cufflinks 13.336     High  
cufflinks 7.833       Low
cufflinks 22.942     High  
cufflinks 12.553     High  
cufflinks 25.343     High  
cufflinks 55.074     High High
cufflinks 28.97     High High
cufflinks 10.815     High  
cufflinks 10.848     High  
cufflinks 10.69     High  
cufflinks 13.021     High  
cufflinks 20.68     High  
cufflinks 10.118     High  
cufflinks 24.727     High  
cufflinks 20.063     High  
cufflinks 15.103     High  

0 Strain