Gene : Bradi2g58140 B. distachyon v3.1
Defline:  (1 of 1) KOG2459 - GPI transamidase complex, GPI17/PIG-S component, involved in glycosylphosphatidylinositol anchor biosynthesis Genomic Order:  7019
Name:  ? Bradi2g58140 Secondary Identifier:  ? PAC:32782619
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g58140 0.5kb upstream 0.5kb upstream 5496 true Bd2: 55947530-55953025 Brachypodium distachyon
Bradi2g58140 0.5kb upstream 0.5kb upstream 500 false Bd2: 55952526-55953025 Brachypodium distachyon
Bradi2g58140 0.5kb downstream 0.5kb downstream 5496 true Bd2: 55947030-55952525 Brachypodium distachyon
Bradi2g58140 0.5kb downstream 0.5kb downstream 500 false Bd2: 55947030-55947529 Brachypodium distachyon
Bradi2g58140 1.0kb upstream 1.0kb upstream 5996 true Bd2: 55947530-55953525 Brachypodium distachyon
Bradi2g58140 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55952526-55953525 Brachypodium distachyon
Bradi2g58140 1.0kb downstream 1.0kb downstream 5996 true Bd2: 55946530-55952525 Brachypodium distachyon
Bradi2g58140 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55946530-55947529 Brachypodium distachyon
Bradi2g58140 2.0kb upstream 2.0kb upstream 6996 true Bd2: 55947530-55954525 Brachypodium distachyon
Bradi2g58140 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55952526-55954525 Brachypodium distachyon
Bradi2g58140 2.0kb downstream 2.0kb downstream 6996 true Bd2: 55945530-55952525 Brachypodium distachyon
Bradi2g58140 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55945530-55947529 Brachypodium distachyon
Bradi2g58140 5.0kb upstream 5.0kb upstream 9996 true Bd2: 55947530-55957525 Brachypodium distachyon
Bradi2g58140 5.0kb upstream 5.0kb upstream 5000 false Bd2: 55952526-55957525 Brachypodium distachyon
Bradi2g58140 5.0kb downstream 5.0kb downstream 9996 true Bd2: 55942530-55952525 Brachypodium distachyon
Bradi2g58140 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55942530-55947529 Brachypodium distachyon
Bradi2g58140 10.0kb upstream 10.0kb upstream 14996 true Bd2: 55947530-55962525 Brachypodium distachyon
Bradi2g58140 10.0kb upstream 10.0kb upstream 10000 false Bd2: 55952526-55962525 Brachypodium distachyon
Bradi2g58140 10.0kb downstream 10.0kb downstream 14996 true Bd2: 55937530-55952525 Brachypodium distachyon
Bradi2g58140 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55937530-55947529 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573332 5269 Grass View MSA
122046562 5273 Angiosperm View MSA
121348153 5274 Embryophyte View MSA
123426160 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.171        
cufflinks 6.114        
cufflinks 6.336        
cufflinks 4.782        
cufflinks 2.927        
cufflinks 5.135        
cufflinks 5.122        
cufflinks 4.7        
cufflinks 4.987        
cufflinks 3.752        
cufflinks 2.466       Low
cufflinks 5.369        
cufflinks 2.45       Low
cufflinks 1.839       Low
cufflinks 3.178        
cufflinks 5.655        
cufflinks 4.898        
cufflinks 11.874     High High
cufflinks 7.323       High
cufflinks 1.466       Low
cufflinks 5.764        
cufflinks 5.741        
cufflinks 4.645        
cufflinks 4.681        
cufflinks 4.482        
cufflinks 5.645        
cufflinks 3.107        
cufflinks 5.821        
cufflinks 5.691        
cufflinks 7.479       High

0 Strain