Gene : Bradi2g58100 B. distachyon v3.1
Defline:  (1 of 5) PTHR24012:SF415 - F12A21.10-RELATED Genomic Order:  7015
Name:  ? Bradi2g58100 Secondary Identifier:  ? PAC:32773852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g58100 0.5kb upstream 0.5kb upstream 4974 true Bd2: 55920995-55925968 Brachypodium distachyon
Bradi2g58100 0.5kb upstream 0.5kb upstream 500 false Bd2: 55920995-55921494 Brachypodium distachyon
Bradi2g58100 0.5kb downstream 0.5kb downstream 4974 true Bd2: 55921495-55926468 Brachypodium distachyon
Bradi2g58100 0.5kb downstream 0.5kb downstream 500 false Bd2: 55925969-55926468 Brachypodium distachyon
Bradi2g58100 1.0kb upstream 1.0kb upstream 5474 true Bd2: 55920495-55925968 Brachypodium distachyon
Bradi2g58100 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55920495-55921494 Brachypodium distachyon
Bradi2g58100 1.0kb downstream 1.0kb downstream 5474 true Bd2: 55921495-55926968 Brachypodium distachyon
Bradi2g58100 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55925969-55926968 Brachypodium distachyon
Bradi2g58100 2.0kb upstream 2.0kb upstream 6474 true Bd2: 55919495-55925968 Brachypodium distachyon
Bradi2g58100 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55919495-55921494 Brachypodium distachyon
Bradi2g58100 2.0kb downstream 2.0kb downstream 6474 true Bd2: 55921495-55927968 Brachypodium distachyon
Bradi2g58100 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55925969-55927968 Brachypodium distachyon
Bradi2g58100 5.0kb upstream 5.0kb upstream 9474 true Bd2: 55916495-55925968 Brachypodium distachyon
Bradi2g58100 5.0kb upstream 5.0kb upstream 5000 false Bd2: 55916495-55921494 Brachypodium distachyon
Bradi2g58100 5.0kb downstream 5.0kb downstream 9474 true Bd2: 55921495-55930968 Brachypodium distachyon
Bradi2g58100 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55925969-55930968 Brachypodium distachyon
Bradi2g58100 10.0kb upstream 10.0kb upstream 14474 true Bd2: 55911495-55925968 Brachypodium distachyon
Bradi2g58100 10.0kb upstream 10.0kb upstream 10000 false Bd2: 55911495-55921494 Brachypodium distachyon
Bradi2g58100 10.0kb downstream 10.0kb downstream 14474 true Bd2: 55921495-55935968 Brachypodium distachyon
Bradi2g58100 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55925969-55935968 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576674 5269 Grass View MSA
122044254 5273 Angiosperm View MSA
121348969 5274 Embryophyte View MSA
123381105 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low  
cufflinks 0.028     Low  
cufflinks 0.028     Low  
cufflinks 0.022     Low  
cufflinks 0.004     Low Low
cufflinks 0.014     Low  
cufflinks 0.017     Low  
cufflinks 0.012     Low  
cufflinks 0.026     Low  
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.101     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.031     Low  
cufflinks 0.036     Low  
cufflinks 0.019     Low  
cufflinks 0.012     Low  
cufflinks 0.007     Low Low
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.067     Low High
cufflinks 0.043     Low  

0 Strain