Gene : Bradi4g23300 B. distachyon v3.1
Defline:  (1 of 1) PTHR12452 - 42-9-9 PROTEIN-RELATED Genomic Order:  2950
Name:  ? Bradi4g23300 Secondary Identifier:  ? PAC:32789709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g23300 0.5kb upstream 0.5kb upstream 1569 true Bd4: 27975164-27976732 Brachypodium distachyon
Bradi4g23300 0.5kb upstream 0.5kb upstream 500 false Bd4: 27976233-27976732 Brachypodium distachyon
Bradi4g23300 0.5kb downstream 0.5kb downstream 1569 true Bd4: 27974664-27976232 Brachypodium distachyon
Bradi4g23300 0.5kb downstream 0.5kb downstream 500 false Bd4: 27974664-27975163 Brachypodium distachyon
Bradi4g23300 1.0kb upstream 1.0kb upstream 2069 true Bd4: 27975164-27977232 Brachypodium distachyon
Bradi4g23300 1.0kb upstream 1.0kb upstream 1000 false Bd4: 27976233-27977232 Brachypodium distachyon
Bradi4g23300 1.0kb downstream 1.0kb downstream 2069 true Bd4: 27974164-27976232 Brachypodium distachyon
Bradi4g23300 1.0kb downstream 1.0kb downstream 1000 false Bd4: 27974164-27975163 Brachypodium distachyon
Bradi4g23300 2.0kb upstream 2.0kb upstream 3069 true Bd4: 27975164-27978232 Brachypodium distachyon
Bradi4g23300 2.0kb upstream 2.0kb upstream 2000 false Bd4: 27976233-27978232 Brachypodium distachyon
Bradi4g23300 2.0kb downstream 2.0kb downstream 3069 true Bd4: 27973164-27976232 Brachypodium distachyon
Bradi4g23300 2.0kb downstream 2.0kb downstream 2000 false Bd4: 27973164-27975163 Brachypodium distachyon
Bradi4g23300 5.0kb upstream 5.0kb upstream 6069 true Bd4: 27975164-27981232 Brachypodium distachyon
Bradi4g23300 5.0kb upstream 5.0kb upstream 5000 false Bd4: 27976233-27981232 Brachypodium distachyon
Bradi4g23300 5.0kb downstream 5.0kb downstream 6069 true Bd4: 27970164-27976232 Brachypodium distachyon
Bradi4g23300 5.0kb downstream 5.0kb downstream 5000 false Bd4: 27970164-27975163 Brachypodium distachyon
Bradi4g23300 10.0kb upstream 10.0kb upstream 11069 true Bd4: 27975164-27986232 Brachypodium distachyon
Bradi4g23300 10.0kb upstream 10.0kb upstream 10000 false Bd4: 27976233-27986232 Brachypodium distachyon
Bradi4g23300 10.0kb downstream 10.0kb downstream 11069 true Bd4: 27965164-27976232 Brachypodium distachyon
Bradi4g23300 10.0kb downstream 10.0kb downstream 10000 false Bd4: 27965164-27975163 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582856 5269 Grass View MSA
122046977 5273 Angiosperm View MSA
121346988 5274 Embryophyte View MSA
123427976 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.172        
cufflinks 5.79        
cufflinks 5.204        
cufflinks 7.503        
cufflinks 6.307        
cufflinks 4.441        
cufflinks 7.167        
cufflinks 5.015        
cufflinks 4.947        
cufflinks 7.547        
cufflinks 5.816        
cufflinks 3.554       Low
cufflinks 3.78       Low
cufflinks 5.914        
cufflinks 3.126       Low
cufflinks 4.884        
cufflinks 8.498        
cufflinks 9.257        
cufflinks 11.862       High
cufflinks 33.456     High High
cufflinks 12.789     High High
cufflinks 4.328        
cufflinks 4.904        
cufflinks 5.323        
cufflinks 7.393        
cufflinks 5.653        
cufflinks 5.611        
cufflinks 7.549        
cufflinks 5.774        
cufflinks 6.954        

0 Strain